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Search query "eutils" returned 39 items

Services (10 of 16)

Showing the top 10 items out of 16 in total
eFetchPubmedService SOAP Us
Views 195 Favourites 0
Categories:
Annotations: 22 Total number of annotations from the provider's definition / description document. 0 Total number of annotations submitted by members of the BioCatalogue. 22 Total number of annotations sourced from other registries. 0
by Pieter Neerincx (9 months ago)
The EFetch services retrieve records in the requested format from several databases hosted by the NCBI.

Provider: National Center for Biotechnology Information (NCBI) | Submitter / Source: Franck TanohGb (about 1 year ago)

Tags on this service:
WSDL Location: http://www.ncbi.nlm.nih.gov/entrez/eutils/soap/v2.0/efetch_pubmed.wsdl | 1 SOAP Operation
PASSED
eFetchJournalsService SOAP Us
Views 110 Favourites 0
Categories:
Annotations: 21 Total number of annotations from the provider's definition / description document. 0 Total number of annotations submitted by members of the BioCatalogue. 21 Total number of annotations sourced from other registries. 0
by Pieter Neerincx (9 months ago)
The EFetch services retrieve records in the requested format from several databases hosted by the NCBI.
by Pieter Neerincx (9 months ago)
This service retrieves information about journals. Hence it does not provide information about articles published in those journals. To retrieve the latter use the well documented eFetchPubmedService instead.
by Pieter Neerincx (9 months ago)
Note: Unfortunately this service cannot be used to retrieve records based on standardised NLM IDs or even better ISSNs. You will need to use the ESearch service to get an NCBI specific "UID" first. These UIDs can then be used to retrieve information about a journal using the eFetchJournalsService. This behaviour is poorly documented on the NCBI site: There are three examples of identifiers used to retrieve a record. Although these do work it is not clear that these identifiers are UIDs. The UIDs from the examples are not listed in the "full record" results returned for those UIDs making the confusion complete. The requirement of using ESearch first causes unnecessary overhead making this ...

Provider: National Center for Biotechnology Information (NCBI) | Submitter / Source: Franck TanohGb (about 1 year ago)

Tags on this service:
WSDL Location: http://www.ncbi.nlm.nih.gov/entrez/eutils/soap/v2.0/efetch_journals.wsdl | 1 SOAP Operation
PASSED
eFetchOmimService SOAP Us
Views 102 Favourites 0
Categories:
Annotations: 23 Total number of annotations from the provider's definition / description document. 0 Total number of annotations submitted by members of the BioCatalogue. 23 Total number of annotations sourced from other registries. 0
by Pieter Neerincx (9 months ago)
The EFetch services retrieve records in the requested format from several databases hosted by the NCBI.

Provider: National Center for Biotechnology Information (NCBI) | Submitter / Source: Franck TanohGb (about 1 year ago)

Tags on this service:
WSDL Location: http://www.ncbi.nlm.nih.gov/entrez/eutils/soap/v2.0/efetch_omim.wsdl | 1 SOAP Operation
PASSED
eUtils SOAP Us
Views 126 Favourites 0
Annotations: 27 Total number of annotations from the provider's definition / description document. 0 Total number of annotations submitted by members of the BioCatalogue. 27 Total number of annotations sourced from other registries. 0
by Rodrigo Lopez (about 1 year ago)
Entrez Programming Utilities are tools that provide access to Entrez data outside of the regular web query interface and may be helpful for retrieving search results for future use in another environment. Home: http://www.ncbi.nlm.nih.gov/entrez/query/static/eutils_help.html

Provider: National Center for Biotechnology Information (NCBI) | Submitter / Source: Franck TanohGb (about 1 year ago)

Tags on this service:
WSDL Location: http://www.ncbi.nlm.nih.gov/entrez/eutils/soap/eutils.wsdl | 14 SOAP Operations
PASSED
eFetchPmcService SOAP Us
Views 165 Favourites 0
Categories:
Annotations: 22 Total number of annotations from the provider's definition / description document. 0 Total number of annotations submitted by members of the BioCatalogue. 22 Total number of annotations sourced from other registries. 0
by Rodrigo Lopez (about 1 year ago)
EFetch: Retrieves records in the requested format from a list of one or more UIs or from user's environment. Base URL: http://eutils.ncbi.nlm.nih.gov/entrez/eutils/efetch.fcgi Home: http://www.ncbi.nlm.nih.gov
by Pieter Neerincx (9 months ago)
The EFetch services retrieve records in the requested format from several databases hosted by the NCBI.

Provider: National Center for Biotechnology Information (NCBI) | Submitter / Source: jennyGb (about 1 year ago)

Tags on this service:
WSDL Location: http://www.ncbi.nlm.nih.gov/entrez/eutils/soap/v2.0/efetch_pmc.wsdl | 1 SOAP Operation
PASSED
eFetchNlmcService SOAP Us
Views 81 Favourites 0
Categories:
Annotations: 15 Total number of annotations from the provider's definition / description document. 0 Total number of annotations submitted by members of the BioCatalogue. 15 Total number of annotations sourced from other registries. 0
by Rodrigo Lopez (about 1 year ago)
EFetch: Retrieves records in the requested format from a list of one or more UIs or from user's environment. Base URL: http://eutils.ncbi.nlm.nih.gov/entrez/eutils/efetch.fcgi?
by Pieter Neerincx (9 months ago)
The EFetch services retrieve records in the requested format from several databases hosted by the NCBI.
by Pieter Neerincx (9 months ago)
Note: this service is poorly documented on the NCBI site like in there is no documentation at all. I tried searching with NLM IDs in a similar way like for the well documented eFetchPubmed and eFetchPmc services, but could not make it work... Therefore there are no example inputs nor example outputs listed here.

Provider: National Center for Biotechnology Information (NCBI) | Submitter / Source: Franck TanohGb (about 1 year ago)

Tags on this service:
WSDL Location: http://www.ncbi.nlm.nih.gov/entrez/eutils/soap/v2.0/efetch_nlmc.wsdl | 1 SOAP Operation
PASSED
eFetchTaxonService SOAP Us
Views 40 Favourites 0
Categories:
Annotations: 4 Total number of annotations from the provider's definition / description document. 0 Total number of annotations submitted by members of the BioCatalogue. 4 Total number of annotations sourced from other registries. 0
by Franck Tanoh (3 months ago)
Get taxonomy information given taxonomy ID

Provider: National Center for Biotechnology Information (NCBI) | Submitter / Source: Franck TanohGb (about 1 year ago)

Tags on this service:
none
WSDL Location: http://www.ncbi.nlm.nih.gov/entrez/eutils/soap/v2.0/efetch_taxon.wsdl | 1 SOAP Operation
PASSED
eFetchSnpService SOAP Us
Views 62 Favourites 0
Categories:
Annotations: 4 Total number of annotations from the provider's definition / description document. 0 Total number of annotations submitted by members of the BioCatalogue. 4 Total number of annotations sourced from other registries. 0
by Franck Tanoh (3 months ago)
Get SNPs information given SNP ID list

Provider: National Center for Biotechnology Information (NCBI) | Submitter / Source: Franck TanohGb (about 1 year ago)

Tags on this service:
none
WSDL Location: http://www.ncbi.nlm.nih.gov/entrez/eutils/soap/v2.0/efetch_snp.wsdl | 1 SOAP Operation
PASSED
eFetchGeneService SOAP Us
Views 118 Favourites 0
Categories:
Annotations: 5 Total number of annotations from the provider's definition / description document. 0 Total number of annotations submitted by members of the BioCatalogue. 5 Total number of annotations sourced from other registries. 0
by Franck Tanoh (3 months ago)
Retrieves Genes in the requested format from a list of one or more unique identifiers.

Provider: National Center for Biotechnology Information (NCBI) | Submitter / Source: Franck TanohGb (about 1 year ago)

Tags on this service:
WSDL Location: http://www.ncbi.nlm.nih.gov/entrez/eutils/soap/v2.0/efetch_gene.wsdl | 1 SOAP Operation
PASSED
eFetchSequence SOAP Us
Views 131 Favourites 0
Annotations: 16 Total number of annotations from the provider's definition / description document. 0 Total number of annotations submitted by members of the BioCatalogue. 16 Total number of annotations sourced from other registries. 0
by Franck Tanoh (3 months ago)
Retrieves sequences in requested format from a list of one or more unique identifiers.

Provider: National Center for Biotechnology Information (NCBI) | Submitter / Source: Franck TanohGb (about 1 year ago)

Tags on this service:
WSDL Location: http://www.ncbi.nlm.nih.gov/entrez/eutils/soap/v2.0/efetch_seq.wsdl | 1 SOAP Operation
PASSED

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SOAP Operations (10 of 23)

Showing the top 10 items out of 23 in total

run_eFetch

1 input | 1 output

Part of Service: eFetchPmcService

Retrieves records in the requested format from PubMed Central (PMC) hosted by the NCBI.
Tags on this SOAP Operation:

run_eGquery

1 input | 1 output

Part of Service: eUtils

Provides Entrez database counts in XML for a single search
Tags on this SOAP Operation:
none

run_eGquery_MS

1 input | 1 output

Part of Service: eUtils

Provides Entrez database counts in XML for a single search. This is a simplified version of 'run_eGquery' .
Tags on this SOAP Operation:
none

run_eInfo

1 input | 1 output

Part of Service: eUtils

Provides field names, index term counts, last update, and available links for each Entrez database.
Tags on this SOAP Operation:
none

run_eInfo_MS

1 input | 1 output

Part of Service: eUtils

Provides field names, index term counts, last update, and available links for each Entrez database. Simplified version of 'run_eInfo' operation
Tags on this SOAP Operation:
none

run_eSearch

1 input | 1 output

Part of Service: eUtils

Searches and retrieves primary IDs (for use in EFetch, ELink, and Summary) and term translations. Supported primary IDs can be found here: http://www.ncbi.nlm.nih.gov/entrez/query/static/eutils_help.html#PrimaryIDs
Tags on this SOAP Operation:
none

run_eSearch_MS

1 input | 1 output

Part of Service: eUtils

Searches and retrieves primary IDs (for use in EFetch, ELink, and Summary) and term translations. Supported primary IDs can be found here: http://www.ncbi.nlm.nih.gov/entrez/query/static/eutils_help.html#PrimaryIDs
Tags on this SOAP Operation:
none

run_eSummary

1 input | 1 output

Part of Service: eUtils

Retrieves document summaries from a list of primary IDs. Supported primary IDs can be found here: http://www.ncbi.nlm.nih.gov/entrez/query/static/eutils_help.html#PrimaryIDs
Tags on this SOAP Operation:
none

run_eSummary_MS

1 input | 1 output

Part of Service: eUtils

Retrieves document summaries from a list of primary IDs. Supported primary IDs can be found here: http://www.ncbi.nlm.nih.gov/entrez/query/static/eutils_help.html#PrimaryIDs
Tags on this SOAP Operation:
none

run_eLink

1 input | 1 output

Part of Service: eUtils

run_eLink can be used to: -Check for the existence of an external or Related Articles link from a list of one or more primary IDs (http://www.ncbi.nlm.nih.gov/entrez/query/static/eutils_help.html#PrimaryIDs); -Retrieve IDs and relevancy scores for links to Entrez databases or Related Articles; -Create a hyperlink to the primary LinkOut provider for a specific ID and database, or list LinkOut URLs and attributes for multiple IDs.
Tags on this SOAP Operation:
none

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