<?xml version="1.0" encoding="UTF-8"?>
<service xlink:href="http://www.biocatalogue.org/services/18" xmlns:xlink="http://www.w3.org/1999/xlink" xsi:schemaLocation="http://www.biocatalogue.org/2009/xml/rest http://www.biocatalogue.org/2009/xml/rest/schema-v1.xsd" resourceType="Service" xlink:title="Service - GTPS" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns:dcterms="http://purl.org/dc/terms/" xmlns="http://www.biocatalogue.org/2009/xml/rest">
  <dc:title>Service - GTPS</dc:title>
  <name>GTPS</name>
  <originalSubmitter xlink:href="http://www.biocatalogue.org/users/27" resourceType="User" xlink:title="Member - Franck Tanoh" resourceName="Franck Tanoh"/>
  <dc:description>"GTPS" is acronym of Gene Trek in Procaryote Space. Various complete genomes of eubacteria and archaea have been registered in the International Nucleotide Sequence Databases (INSD) of DDBJ/EMBL/GenBank. The annotation and sequence data are available from GIB (Genome Information Broker; http://gib.genes.nig.ac.jp/). However, annotations for genomic sequence of eubacteria and archaea released from INSD are often carried out by the different protocols such as minimum length of the ORF specified by the prediction program, threshold value of blast search and version number of the reference data used for blast and motif scan. Therefore, some inconsistencies of the ORF data are found in genomic annotations. The purpose of GTPS is to reannotate the ORFs among microorganisms in GIB data by using a common protocol and diffuse the results to every users as a resource for gnomescale analysis on microbes. The results are graded into AAAA (top grade) to X (lowermost grade) categories by curating the result of blastp and InterProScan analysis. The service provides you with all the result of reannotated data by the graphical interface and the flat file.</dc:description>
  <serviceTechnologyTypes>
    <type>SOAP</type>
  </serviceTechnologyTypes>
  <latestMonitoringStatus>
    <label>PASSED</label>
    <message>All tests were successful for this service</message>
    <symbol xlink:href="http://www.biocatalogue.org/images/tick-sphere-50.png?1267710902" xlink:title="Large status symbol icon for this monitoring status"/>
    <smallSymbol xlink:href="http://www.biocatalogue.org/images/small-tick-sphere-50.png?1267710902" xlink:title="Small status symbol icon for this monitoring status"/>
    <lastChecked>2010-07-30T04:00:59Z</lastChecked>
  </latestMonitoringStatus>
  <dcterms:created>2008-11-19T15:48:00Z</dcterms:created>
  <deployments xlink:href="http://www.biocatalogue.org/services/18/deployments" resourceType="Service">
    <serviceDeployment xlink:href="http://www.biocatalogue.org/service_deployments/18" resourceType="ServiceDeployment">
      <endpoint>http://xml.nig.ac.jp/xddbj/GTPS</endpoint>
      <serviceProvider xlink:href="http://www.biocatalogue.org/service_providers/4" resourceType="ServiceProvider" xlink:title="Service Provider - DNA Data Bank of Japan (DDBJ)">
        <dc:title>Service Provider - DNA Data Bank of Japan (DDBJ)</dc:title>
        <name>DNA Data Bank of Japan (DDBJ)</name>
        <dc:description>DNA Data Bank of Japan (DDBJ) is the sole nucleotide sequence data bank in Asia, which is officially certified to collect nucleotide sequences from researchers and to issue the internationally recognized accession number to data submitters.</dc:description>
        <dcterms:created>2008-11-19T09:35:25Z</dcterms:created>
      </serviceProvider>
      <location>
        <city></city>
        <country>Japan</country>
        <iso3166CountryCode>JP</iso3166CountryCode>
        <flag xlink:href="http://www.biocatalogue.org/images/flags/jp.png?1267710900" xlink:title="Flag icon for this location"></flag>
      </location>
      <submitter xlink:href="http://www.biocatalogue.org/users/27" resourceType="User" xlink:title="Member - Franck Tanoh" resourceName="Franck Tanoh"/>
      <dcterms:created>2008-11-19T15:48:00Z</dcterms:created>
    </serviceDeployment>
  </deployments>
  <variants xlink:href="http://www.biocatalogue.org/services/18/variants" resourceType="Service">
    <soapService xlink:href="http://www.biocatalogue.org/soap_services/19" resourceType="SoapService" xlink:title="Soap Service - GTPS">
      <dc:title>Soap Service - GTPS</dc:title>
      <name>GTPS</name>
      <wsdlLocation>http://xml.nig.ac.jp/wsdl/GTPS.wsdl</wsdlLocation>
      <submitter xlink:href="http://www.biocatalogue.org/users/27" resourceType="User" xlink:title="Member - Franck Tanoh" resourceName="Franck Tanoh"/>
      <dc:description></dc:description>
      <documentationUrl>http://xml.ddbj.nig.ac.jp/index.html</documentationUrl>
      <dcterms:created>2008-11-19T15:47:56Z</dcterms:created>
    </soapService>
  </variants>
  <related>
    <withSummary xlink:href="http://www.biocatalogue.org/services/18?include=summary" resourceType="Service" xlink:title="View of this Service including the summary section"/>
    <withMonitoring xlink:href="http://www.biocatalogue.org/services/18?include=monitoring" resourceType="Service" xlink:title="View of this Service including the monitoring section"/>
    <withAllSections xlink:href="http://www.biocatalogue.org/services/18?include=all" resourceType="Service" xlink:title="A complete view of this Service which includes the summary, deployments, variants and monitoring"/>
    <summary xlink:href="http://www.biocatalogue.org/services/18/summary" resourceType="Service" xlink:title="Just the summary of this Service"/>
    <deployments xlink:href="http://www.biocatalogue.org/services/18/deployments" resourceType="Service" xlink:title="Just the deployments for this Service"/>
    <variants xlink:href="http://www.biocatalogue.org/services/18/variants" resourceType="Service" xlink:title="Just the variants (i.e.: SOAP and/or REST) for this Service"/>
    <monitoring xlink:href="http://www.biocatalogue.org/services/18/monitoring" resourceType="Service" xlink:title="Just the monitoring info for this Service"/>
    <annotations xlink:href="http://www.biocatalogue.org/services/18/annotations" resourceType="Annotations" xlink:title="All annotations on this Service"/>
  </related>
</service>
