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Cog_error Archived / Deprecated

This service has been archived because it may not be active anymore (or is close to being non active). Please do not use it as it may not be accessible.

Specified Name (from WSDL): WSWUBlastService |
aka WU-BLAST aka WUBlast Add_annotation_inactiveAdd_annotation_inactiveLog in to add alternative_name
UNCHECKED
Annotations: 94 Total number of annotations from the provider's definition / description document. 69 Total number of annotations submitted by members of the BioCatalogue. 25 Total number of annotations sourced from other registries. 0

Overview

Provider:
European Bioinformatics Institute (EBI)

Location:
United Kingdom Gb

Submitter / Source:
EMBL-EBI SupportGb (over 3 years ago)

Base URL:
http://www.ebi.ac.uk/Tools/es/ws-servers/WSWUBlast

WSDL Location:
http://www.ebi.ac.uk/Tools/webservices/wsdl/WSWUBlast.wsdl (download last cached WSDL file)

Description(s):
from provider's description doc (over 2 years ago)

WSWUBlast: sequence similarity searches using WU-BLAST (see http://www.ebi.ac.uk/Tools/webservices/services/wublast).

Note: this RPC/encoded SOAP service was decommissioned on Monday 28th March 2011, see http://www.ebi.ac.uk/Tools/webservices/services/wublast for details of alternative REST and document/literal SOAP services.

by Rodrigo Lopez (over 3 years ago)

WU-BLAST2 stands for Washington University Basic Local Alignment Search Tool Version 2.0. The emphasis of this tool is to find regions of sequence similarity quickly, with minimum loss of sensitivity. This will yield functional and evolutionary clues abou

by Rodrigo Lopez (over 3 years ago)

Input data for this service can be obtained from wsdbfetch (see: http://www.ebi.ac.uk/ws/services/WSDbfetch)

by Hamish McWilliam (over 2 years ago)

This RPC/encoded SOAP service is deprecated, and due to be retired in 2011.

Please use the equivalent REST or document/literal SOAP services instead.

License(s): Info
None
Cost: Info
by Franck Tanoh (over 3 years ago)

free

Usage Conditions: Info
by Franck Tanoh (over 3 years ago)

Users of this service may not submit more than 25 JOBS at a time and may not submit more JOBS until they have obtained results for the last 25. More information on these restrictions can be found at http://www.ebi.ac.uk/Tools/webservices/

by Hamish McWilliam (over 3 years ago)

E-mail supplied for submission must be a valid e-mail address and no more than 25 concurrent jobs should be submitted at any one time, see http://www.ebi.ac.uk/Tools/webservices/about/webservices.

EMBL-EBI Terms of Use: http://www.ebi.ac.uk/Information/t

Citations: Info
None

Info Members Responsible for this Service (1)

Info Favourited By (0)

No one

Info Similar Services (100)

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SOAP Operations (19)

These are the SOAP operations available for the SOAP variant of this service. Click on each one to get more information and to annotate.
Quick Browse | blastn | blastp | checkStatus | doWUBlast | getDatabases | getFilters | getIds | getMatrices | getOutput | getPrograms | getResults | getSensitivity | getSort | getStats | getXML | getXmlFormats | poll | polljob | runWUBlast |

blastn

3 inputs | 1 output

Part of Service: WSWUBlast

Submit a nucleotide sequence vs. nucleotide database search (blastn) using default parameters. See http://www.ebi.ac.uk/Tools/webservices/services/wublast#blastn_database_sequence_email
Tags on this SOAP Operation:
none

blastp

3 inputs | 1 output

Part of Service: WSWUBlast

Submit a protein sequence vs. protein database search (blastp) using default parameters. See http://www.ebi.ac.uk/Tools/webservices/services/wublast#blastp_database_sequence_email
Tags on this SOAP Operation:
none

checkStatus

1 input | 1 output

Part of Service: WSWUBlast

Get the status of a submited job (see http://www.ebi.ac.uk/Tools/webservices/services/wublast#checkstatus_jobid)
Tags on this SOAP Operation:
none

doWUBlast

2 inputs | 1 output

Part of Service: WSWUBlast

Deprecated (see http://www.ebi.ac.uk/Tools/webservices/services/wublast#dowublast_params_content)
Tags on this SOAP Operation:
none

getDatabases

0 inputs | 1 output

Part of Service: WSWUBlast

Get the list of available databases (see http://www.ebi.ac.uk/Tools/webservices/services/wublast#getdatabases)
Tags on this SOAP Operation:
none

getFilters

0 inputs | 1 output

Part of Service: WSWUBlast

Get the list of available input sequence filtering methods (see http://www.ebi.ac.uk/Tools/webservices/services/wublast#getfilters)
Tags on this SOAP Operation:
none

getIds

1 input | 1 output

Part of Service: WSWUBlast

Get the hit identifiers from the analysis result (see http://www.ebi.ac.uk/Tools/webservices/services/wublast#getids_jobid)
Tags on this SOAP Operation:
none

getMatrices

0 inputs | 1 output

Part of Service: WSWUBlast

Get the list of available scoring matrices (see http://www.ebi.ac.uk/Tools/webservices/services/wublast#getmatrices)
Tags on this SOAP Operation:
none

getOutput

1 input | 1 output

Part of Service: WSWUBlast

Get plain text output for a job (see http://www.ebi.ac.uk/Tools/webservices/services/wublast#getoutput_jobid)
Tags on this SOAP Operation:
none

getPrograms

0 inputs | 1 output

Part of Service: WSWUBlast

Get the list of available analysis programs (see http://www.ebi.ac.uk/Tools/webservices/services/wublast#getprograms)
Tags on this SOAP Operation:
none

getResults

1 input | 1 output

Part of Service: WSWUBlast

Get the available result types for a completed job (see http://www.ebi.ac.uk/Tools/webservices/services/wublast#getresults_jobid)
Tags on this SOAP Operation:
none

getSensitivity

0 inputs | 1 output

Part of Service: WSWUBlast

Get list of sensitivity values (see http://www.ebi.ac.uk/Tools/webservices/services/wublast#getsensitivity)
Tags on this SOAP Operation:
none

getSort

0 inputs | 1 output

Part of Service: WSWUBlast

Get list of available sorting options (see http://www.ebi.ac.uk/Tools/webservices/services/wublast#getsort)
Tags on this SOAP Operation:
none

getStats

0 inputs | 1 output

Part of Service: WSWUBlast

Get the list of available statistical methods (see http://www.ebi.ac.uk/Tools/webservices/services/wublast#getstats)
Tags on this SOAP Operation:
none

getXML

1 input | 1 output

Part of Service: WSWUBlast

Get XML output for a job (see http://www.ebi.ac.uk/Tools/webservices/services/wublast#getxml_jobid)
Tags on this SOAP Operation:
none

getXmlFormats

0 inputs | 1 output

Part of Service: WSWUBlast

Get list of options for XML formats (see http://www.ebi.ac.uk/Tools/webservices/services/wublast#getxmlformats)
Tags on this SOAP Operation:
none

poll

2 inputs | 1 output

Part of Service: WSWUBlast

Get the results of a job (see http://www.ebi.ac.uk/Tools/webservices/services/wublast#poll_jobid_type)
Tags on this SOAP Operation:
none

polljob

2 inputs | 1 output

Part of Service: WSWUBlast

Deprecated (see http://www.ebi.ac.uk/Tools/webservices/services/wublast#polljob_jobid_outformat)
Tags on this SOAP Operation:
none

runWUBlast

2 inputs | 1 output

Part of Service: WSWUBlast

Submit a WU-BLAST job (see http://www.ebi.ac.uk/Tools/webservices/services/wublast#runwublast_params_content)
Tags on this SOAP Operation:
none

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Archived Operations (0) Info


Examples

Monitoring

History

 

Info Updates from WSDL

WSDL Location: http://www.ebi.ac.uk/Tools/webservices/wsdl/WSWUBlast.wsdl

Expand Over 2 years ago 1 update
Expand Over 2 years ago 1 update
Expand Over 2 years ago 22 updates