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NCBI BLAST (SOAP)

3946 0 NCBI BLAST (SOAP) SOAP

Specified Name (from WSDL): JDispatcherService |

aka ncbiblast aka tblastn aka tblastx aka blastn aka blastp aka blast Add_annotation_inactive

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Overview

Provider:
European Bioinformatics Institute (EBI)

Location:
United Kingdom

Submitter / Source:
EMBL-EBI Support (over 3 years ago)

Base URL:
http://www.ebi.ac.uk/Tools/services/soap/ncbiblast

WSDL Location:
http://www.ebi.ac.uk/Tools/services/soap/ncbiblast?wsdl (download last cached WSDL file)

Documentation URL(s):

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EMBL-EBI Support (about 1 year ago)

http://www.ebi.ac.uk/Tools/webservices/services/sss/ncbi_blast_soap

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Yung Long Li (about 1 year ago)

SAWSDL: http://www.purl.org/SemanticallyAnnotated/ncbiblast.sawsdl

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Description(s):

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Franck Tanoh (over 2 years ago)

NCBI BLAST is a sequence similarity search program. The emphasis is to find regions of sequence similarity, which will yield functional and evolutionary clues about the structure and function of the query sequence.

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License(s): Info

Info

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EMBL-EBI Support (about 1 year ago)

EMBL-EBI Terms of Use: http://www.ebi.ac.uk/Information/termsofuse.html

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Cost:

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EMBL-EBI Support (about 1 year ago)

Free.

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Usage Conditions: Info

Info

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EMBL-EBI Support (about 1 year ago)

E-mail supplied for submission must be a valid e-mail address and no more than 25 concurrent jobs should be submitted at any one time, see http://www.ebi.ac.uk/Tools/webservices/about/webservices and the EMBL-EBI Terms of Use: http://www.ebi.ac.uk/Informa

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Contact Info: Info

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EMBL-EBI Support (about 1 year ago)

EMBL-EBI Support: http://www.ebi.ac.uk/support/index.php?query=WebServices

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Publications: Info

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EMBL-EBI Support (about 1 year ago)

Goujon M., McWilliam H., Li W., Valentin F., Squizzato S., Paern J. and Lopez R. (2010)
"A new bioinformatics analysis tools framework at EMBL-EBI."
Nucleic Acids Res. 38:W695-9
PMID: 20439314 (http://www.ebi.ac.uk/citexplore/citationDetails.do?externalId

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EMBL-EBI Support (about 1 year ago)

Altschul S.F., Madden T.L., Schaffer A.A., Zhang J., Zhang Z., Miller W. and Lipman D.J. (1997)
"Gapped BLAST and PSI-BLAST: a new generation of protein database search programs."
Nucleic Acids Res. 25(17):3389-402.
PMID: 9254694 (http://www.ebi.ac.uk/cit

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Citations: Info

Info

None

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Info Members Responsible for this Service (1)

EMBL-EBI Support

Tags (4)

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SOAP Operations (6)

These are the SOAP operations available for the SOAP variant of this service. Click on each one to get more information and to annotate.

Quick Browse | getParameterDetails | getParameters | getResult | getResultTypes | getStatus | run |

getParameterDetails

1 input | 1 output

Part of Service: NCBI BLAST (SOAP)

Get some details about a parameter (e.g. name, description, values, etc.)

Tags on this SOAP Operation:

none

1 input | 1 output

Part of Service: NCBI BLAST (SOAP)

List the names of the parameters available before submission

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none

1 input | 1 output

Part of Service: NCBI BLAST (SOAP)

Get a job result formatted using a particular renderer

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none

1 input | 1 output

Part of Service: NCBI BLAST (SOAP)

Get the list of renderers available to output a job result (i.e. the list of available output types)

Tags on this SOAP Operation:

none

1 input | 1 output

Part of Service: NCBI BLAST (SOAP)

Get the status of a submitted job

Tags on this SOAP Operation:

none

1 input | 1 output

Part of Service: NCBI BLAST (SOAP)

Submit an analysis job

Tags on this SOAP Operation:

none

Archived Operations (0)

Examples

Monitoring

History

Info Updates from WSDL

WSDL Location: http://www.ebi.ac.uk/Tools/services/soap/ncbiblast?wsdl

About 1 year ago 1 update

Over 3 years ago 38 updates

The namespace of the SOAP service has been updated from '' to 'http://soap.jdispatcher.ebi.ac.uk'.
A new port called 'JDispatcherServiceHttpPort' was found.
The description for the operation 'run' has been updated.
The parent port for the operation 'run' has been updated to 'JDispatcherServiceHttpPort'.
A new input called 'parameters' for operation 'run' was found.
The input 'run' for the operation 'run' has been removed from the WSDL (and thus archived in the BioCatalogue).
A new output called 'parameters' for operation 'run' was found.
The output 'runResponse' for the operation 'run' has been removed from the WSDL (and thus archived in the BioCatalogue).
The description for the operation 'getStatus' has been updated.
The parent port for the operation 'getStatus' has been updated to 'JDispatcherServiceHttpPort'.
A new input called 'parameters' for operation 'getStatus' was found.
The input 'getStatus' for the operation 'getStatus' has been removed from the WSDL (and thus archived in the BioCatalogue).
A new output called 'parameters' for operation 'getStatus' was found.
The output 'getStatusResponse' for the operation 'getStatus' has been removed from the WSDL (and thus archived in the BioCatalogue).
The description for the operation 'getResultTypes' has been updated.
The parent port for the operation 'getResultTypes' has been updated to 'JDispatcherServiceHttpPort'.
A new input called 'parameters' for operation 'getResultTypes' was found.
The input 'getResultTypes' for the operation 'getResultTypes' has been removed from the WSDL (and thus archived in the BioCatalogue).
A new output called 'parameters' for operation 'getResultTypes' was found.
The output 'getResultTypesResponse' for the operation 'getResultTypes' has been removed from the WSDL (and thus archived in the BioCatalogue).
The description for the operation 'getResult' has been updated.
The parent port for the operation 'getResult' has been updated to 'JDispatcherServiceHttpPort'.
A new input called 'parameters' for operation 'getResult' was found.
The input 'getResult' for the operation 'getResult' has been removed from the WSDL (and thus archived in the BioCatalogue).
A new output called 'parameters' for operation 'getResult' was found.
The output 'getResultResponse' for the operation 'getResult' has been removed from the WSDL (and thus archived in the BioCatalogue).
The description for the operation 'getParameters' has been updated.
The parent port for the operation 'getParameters' has been updated to 'JDispatcherServiceHttpPort'.
A new input called 'parameters' for operation 'getParameters' was found.
The input 'getParameters' for the operation 'getParameters' has been removed from the WSDL (and thus archived in the BioCatalogue).
A new output called 'parameters' for operation 'getParameters' was found.
The output 'getParametersResponse' for the operation 'getParameters' has been removed from the WSDL (and thus archived in the BioCatalogue).
The description for the operation 'getParameterDetails' has been updated.
The parent port for the operation 'getParameterDetails' has been updated to 'JDispatcherServiceHttpPort'.
A new input called 'parameters' for operation 'getParameterDetails' was found.
The input 'getParameterDetails' for the operation 'getParameterDetails' has been removed from the WSDL (and thus archived in the BioCatalogue).
A new output called 'parameters' for operation 'getParameterDetails' was found.
The output 'getParameterDetailsResponse' for the operation 'getParameterDetails' has been removed from the WSDL (and thus archived in the BioCatalogue).

[ link to these changes ]

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The BioCatalogue project is funded by the BBSRC (BB/F01046X/1, BB/F010540/1)

Copyright (c) 2008 - 2013 The University of Manchester and the European Bioinformatics Institute (EMBL-EBI)

Codebase license: BSD License
Content license: Creative Commons Public Domain License
System version: 1.1.0
API version: 1.2.0b