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Views 67 Favourites 0 Web Service DDBJ_GTOP REST Jp

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Annotations: 4 Total number of annotations from the provider's definition / description document. 0 Total number of annotations submitted by members of the BioCatalogue. 4 Total number of annotations sourced from other registries. 0

Overview

Provider:
DNA Data Bank of Japan (DDBJ)

Location:
JAPAN Jp

Submitter / Source:
Franck TanohGb (4 months ago)

Base URL:
http://xml.nig.ac.jp/rest/Invoke?service=Gtop

Description(s):
by Franck Tanoh (4 months ago)

GTOP is a database built by the Laboratory of Gene-product Informatics at the National Institute of Genetics consisting of data analyses of proteins identified by various genome projects. This database mainly uses sequence homology analyses and features extensive utilization of information on three-dimensional structures.
SOAP variant: http://www.biocatalogue.org/services/17

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REST Endpoints (3)

Quick Browse | getAcList | getMasterInfo | getOrganismList |

getAcList | GET /&method=getAcList

Part of Service: DDBJ_GTOP

Part of Endpoint Group: none

Template: Help_icon http://xml.nig.ac.jp/rest/Invoke?service=Gtop&method=getAcList

by Franck Tanoh (4 months ago)
Get the list of species ID in GTOP, ID in source database, accession number and source database name.
Tags on this endpoint:
none

getMasterInfo | GET /&method=getMasterInfo

Part of Service: DDBJ_GTOP

Part of Endpoint Group: none

Template: Help_icon http://xml.nig.ac.jp/rest/Invoke?service=Gtop&method=getAcList&orfID={orfID}&organism={organism}

by Franck Tanoh (4 months ago)
Get result of GTOP analysis from gene ID and species ID.
Tags on this endpoint:
none

getOrganismList | GET /&method=getOrganismList

Part of Service: DDBJ_GTOP

Part of Endpoint Group: none

Template: Help_icon http://xml.nig.ac.jp/rest/Invoke?service=Gtop&method=getAcList

by Franck Tanoh (4 months ago)
Get organism list registered in GTOP database.
Tags on this endpoint:
none

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Monitoring

Overall status: PASSED

Availability Checks

Endpoint : http://xml.nig.ac.jp/rest/Invoke?service=Gtop

Monitored Since : Friday May 07 , 2010

PASSED

Recent History

  • PASSED about 13 hours ago
  • PASSED 1 day ago
  • PASSED 2 days ago
  • PASSED 3 days ago
  • PASSED 4 days ago

Example Endpoint : http://xml.nig.ac.jp/rest/Invoke?service=Gtop&method=getAcList

Monitored Since : Wednesday May 26 , 2010

PASSED

Recent History

  • PASSED about 13 hours ago
  • PASSED 1 day ago
  • PASSED 2 days ago
  • PASSED 3 days ago
  • PASSED 4 days ago

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