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Views 30 Favourites 0 Web Service knotinframeImplementationService SOAP De

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Annotations: 16 Total number of annotations from the provider's definition / description document. 5 Total number of annotations submitted by members of the BioCatalogue. 11 Total number of annotations sourced from other registries. 0

Overview

Provider:
Bielefeld University

Location:
Bielefeld, GERMANY De

Submitter / Source:
Franck TanohGb (3 months ago)

Base URL:
http://bibiwsserv.techfak.uni-bielefeld.de/knotinframe/axis/knotinframePort

WSDL Location:
http://bibiserv.techfak.uni-bielefeld.de/wsdl/knotinframe.wsdl (download last cached WSDL file)

Description(s):
by Franck Tanoh (3 months ago)

KnotInFrame is a pipeline to predict ribosomal -1 frameshift sites with a simple pseudoknot as secondary structure in DNA and RNA sequences. The prediction is based on a comparison between the minimal free energy (mfe) structure calculated by RNAfold ( http://www.tbi.univie.ac.at/~ivo/RNA/ ) from the Vienna package and the mfe-structure computed by a modified version of pknotsRG-mfe, called pknotsRG-frameshift developed by J. Reeder/R.Giegerich.

License(s): Info
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SOAP Operations (2)

These are the SOAP operations available for the SOAP variant of this service. Click on each one to get more information and to annotate.
Quick Browse | request_orig | response_orig |

request_orig

2 inputs | 1 output

Part of Service: knotinframeImplementationService

Takes as input DNA or RNA sequences in fasta format and returns either a unique id or in case of an error a fault message.
Tags on this SOAP Operation:

response_orig

1 input | 1 output

Part of Service: knotinframeImplementationService

Gets the id returned by the request_orig operation as input parameter and returns the calculated ribosomal -1 frameshift sites.
Tags on this SOAP Operation:
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Archived Operations (0) Info


Monitoring

Overall status: PASSED

Availability Checks

Endpoint : http://bibiwsserv.techfak.uni-bielefeld.de/knotinframe/axis/knotinframePort

Monitored Since : Thursday May 20 , 2010

PASSED

Recent History

  • PASSED about 19 hours ago
  • PASSED 1 day ago
  • PASSED 2 days ago
  • PASSED 3 days ago
  • FAILED 4 days ago

Wsdl Location : http://bibiserv.techfak.uni-bielefeld.de/wsdl/knotinframe.wsdl

Monitored Since : Thursday May 20 , 2010

PASSED

Recent History

  • PASSED about 19 hours ago
  • PASSED 1 day ago
  • PASSED 2 days ago
  • PASSED 3 days ago
  • PASSED 4 days ago

Test Scripts

About TestScripts Click here for more info on test scriptsExpand
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News

 

Info Updates from WSDL

WSDL Location: http://bibiserv.techfak.uni-bielefeld.de/wsdl/knotinframe.wsdl

Expand 3 months ago 1 update