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Specified Name (by submitter): PDB_describePDB |
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Annotations: 6 Total number of annotations from the provider's definition / description document. 0 Total number of annotations submitted by members of the BioCatalogue. 6 Total number of annotations sourced from other registries. 0

Overview

Provider:
Protein Data Bank, USA (RCSB PDB)

Location:
San Diego, UNITED STATES Us

Submitter / Source:
Franck TanohGb (3 months ago)

Base URL:
http://www.pdb.org/pdb/rest

Description(s):
by Franck Tanoh (3 months ago)

RESTful interface to search and retrieve data from the Protein Data Bank (PDB). The Protein Data Bank is the single worldwide repository of information about the 3D structures of large biological molecules, including proteins and nucleic acids.
website: http://www.pdb.org/pdb

License(s): Info
None
Cost: Info
by Franck Tanoh (3 months ago)

free

Usage Conditions: Info
No info yet
Contact Info: Info
None
Publications: Info
None
Citations: Info
None

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REST Endpoints (8)

describePDB | GET /describePDB

Part of Service: PDB

Part of Endpoint Group: none

Template: Help_icon http://www.pdb.org/pdb/rest/describePDB?structureId={structureId}

by Franck Tanoh (3 months ago)
Access overall descriptions of a PDB file.
Tags on this endpoint:
none

describeMol | GET /describeMol

Part of Service: PDB

Part of Endpoint Group: none

Template: Help_icon http://www.pdb.org/pdb/rest/describePDB?structureId={structureId}

by Franck Tanoh (3 months ago)
Access the descriptions of the entities that are contained in a PDB file.
Tags on this endpoint:
none

describeHet | GET /describeHet

Part of Service: PDB

Part of Endpoint Group: none

Template: Help_icon http://www.pdb.org/pdb/rest/describePDB?chemicalID={chemicalID}

by Franck Tanoh (3 months ago)
Access the descriptions of the chemical components based on their IDs.
Tags on this endpoint:
none

idStatus | GET /idStatus

Part of Service: PDB

Part of Endpoint Group: none

Template: Help_icon http://www.pdb.org/pdb/rest/describePDB?structureId={structureId}

by Franck Tanoh (3 months ago)
Get Information about the release status for one or multiple PDB ids.
Tags on this endpoint:
none

getUnreleased | GET /getUnreleased

Part of Service: PDB

Part of Endpoint Group: none

Template: Help_icon http://www.pdb.org/pdb/rest/describePDB?structureId={structureId}

by Franck Tanoh (3 months ago)
Get a list of PDB IDs that have not been released yet.
Tags on this endpoint:
none

ligandInfo | GET /ligandInfo

Part of Service: PDB

Part of Endpoint Group: none

Template: Help_icon http://www.pdb.org/pdb/rest/describePDB?structureId={structureId}

by Franck Tanoh (3 months ago)
List the ligands that can be found in a PDB entry.
Tags on this endpoint:
none

smilesQuery | GET /smilesQuery

Part of Service: PDB

Part of Endpoint Group: none

Template: Help_icon http://www.pdb.org/pdb/rest/describePDB?dissimilarity={dissimilarity}&search_type={search_type}&smiles={smiles}

by Franck Tanoh (3 months ago)
Lists the ligands and PDB IDs that match a SMILES query.
Tags on this endpoint:
none

goTerms | GET /goTerms

Part of Service: PDB

Part of Endpoint Group: none

Template: Help_icon http://www.pdb.org/pdb/rest/describePDB?structureId={structureId}

by Franck Tanoh (3 months ago)
List the Gene Ontology terms that have been annotated for a PDB chain.
Tags on this endpoint:
none

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Monitoring

Overall status: PASSED

Availability Checks

Example Endpoint : http://www.pdb.org/pdb/rest/describePDB?structureId=4hhb

Monitored Since : Thursday June 03 , 2010

PASSED

Recent History

  • PASSED about 20 hours ago
  • PASSED 1 day ago
  • PASSED 2 days ago
  • PASSED 3 days ago
  • PASSED 4 days ago

Example Endpoint : http://www.pdb.org/pdb/rest/describePDB?structureId=4hhb,1hhb

Monitored Since : Thursday June 03 , 2010

PASSED

Recent History

  • PASSED about 20 hours ago
  • PASSED 1 day ago
  • PASSED 2 days ago
  • PASSED 3 days ago
  • PASSED 4 days ago

Endpoint : http://www.pdb.org/pdb/rest

Monitored Since : Friday June 04 , 2010

PASSED

Recent History

  • PASSED about 20 hours ago
  • PASSED 1 day ago
  • PASSED 2 days ago
  • PASSED 3 days ago
  • PASSED 4 days ago

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