47 0 DDBJ_GTPS REST

No alternative names Add_annotation_inactive

Categories:

View the comments on this service

Overview

Provider:
DNA Data Bank of Japan (DDBJ)

Location:
JAPAN

Submitter / Source:
Franck Tanoh (2 months ago)

Base URL:
http://xml.nig.ac.jp/rest/Invoke?service=GTPS

Documentation URL(s):

header=[] body=[Member] cssheader=[boxoverTooltipHeader] cssbody=[boxoverTooltipBody] delay=[200]

Franck Tanoh (2 months ago)

http://xml.ddbj.nig.ac.jp/wabi/Method?serviceName=GTPS&mode=methodList&lang=en

Description(s):

Franck Tanoh (2 months ago)

"GTPS" is acronym of Gene Trek in Procaryote Space. Various complete genomes of eubacteria and archaea have been registered in the International Nucleotide Sequence Databases (INSD) of DDBJ/EMBL/GenBank. The annotation and sequence data are available from GIB (Genome Information Broker; http://gib.genes.nig.ac.jp/).

License(s): Info

None

Cost:

No info yet

Usage Conditions: Info

No info yet

Contact Info: Info

None

Publications: Info

None

Citations: Info

None

Tags (1)

Ratings by Members (0)

	Average	Your Rating
Documentation	Currently 0.0/5 Stars. (0)	--

Info Favourited By (0)

No one

Info Similar Services (100)

Show all Show top 10 only

REST Endpoints (8)

What is an endpoint?

getChIDFromOrganismName | GET /&method=getChIDFromOrganismName

Part of Service: DDBJ_GTPS

Part of Endpoint Group: none

Template: Help_icon http://xml.nig.ac.jp/rest/Invoke?service=GTPS&method=getChIDFromOrganismName&orgName={orgName}

Franck Tanoh (2 months ago)

Get chromosome ID of a organism

Tags on this endpoint:

getChIDList | GET /&method=getChIDList

Part of Service: DDBJ_GTPS

Part of Endpoint Group: none

Template: Help_icon http://xml.nig.ac.jp/rest/Invoke?service=GTPS&method=getChIDFromOrganismName

Franck Tanoh (2 months ago)

Get chromosome ID list registered in GTPS database.

Tags on this endpoint:

none

getFtIDList | GET /&method=getFtIDList

Part of Service: DDBJ_GTPS

Part of Endpoint Group: none

Template: Help_icon http://xml.nig.ac.jp/rest/Invoke?service=GTPS&method=getChIDFromOrganismName&chid={chid}

Franck Tanoh (2 months ago)

Get feature ID list of a chromosome ID.

Tags on this endpoint:

getFeatureInformation | GET /&method=getFeatureInformation

Part of Service: DDBJ_GTPS

Part of Endpoint Group: none

Template: Help_icon http://xml.nig.ac.jp/rest/Invoke?service=GTPS&method=getChIDFromOrganismName&chid={chid}&ftid={ftid}

Franck Tanoh (2 months ago)

Get feature information of a chromosome ID and a feature ID.

Tags on this endpoint:

none

getOrganismList | GET /&method=getOrganismList

Part of Service: DDBJ_GTPS

Part of Endpoint Group: none

Template: Help_icon http://xml.nig.ac.jp/rest/Invoke?service=GTPS&method=getChIDFromOrganismName

Franck Tanoh (2 months ago)

Get organism name list registered in GTPS database.

Tags on this endpoint:

none

getOrganismNameFromChid | GET /&method=getOrganismNameFromChid

Part of Service: DDBJ_GTPS

Part of Endpoint Group: none

Template: Help_icon http://xml.nig.ac.jp/rest/Invoke?service=GTPS&method=getChIDFromOrganismName&chid={chid}

Franck Tanoh (2 months ago)

Get organism name of a chromosome ID.

Tags on this endpoint:

searchSimple | GET /&method=searchSimple

Part of Service: DDBJ_GTPS

Part of Endpoint Group: none

Template: Help_icon http://xml.nig.ac.jp/rest/Invoke?service=GTPS&method=getChIDFromOrganismName&keyword={keyword}&limit={limit}&offset={offset}

Franck Tanoh (2 months ago)

Search features against GTPS database.

Tags on this endpoint:

none

checkAnnotation | GET /?method=checkAnnotation

Part of Service: DDBJ_GTPS

Part of Endpoint Group: none

Template: Help_icon http://xml.nig.ac.jp/rest/Invoke?service=GTPS&method=getChIDFromOrganismName&proteinId={proteinId}

Franck Tanoh (2 months ago)

Check annotation of the specified protein ID. If the annotation is unknown 'hypothetical protein' is returned, otherwise the valid annotation of the specified protein ID is returned.

Tags on this endpoint:

none