anthony.bretaudeau (over 2 years ago) hmmalign: align sequences to a profile HMM
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hmmalign
SOAP 
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Annotations: 39
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Overview
Provider:
GenOuest
Location:
FRANCE
Submitter / Source:
anthony.bretaudeau
(over 2 years ago)
Base URL:
http://webservices.genouest.org/opal2/services/hmmalign
WSDL Location:
http://webservices.genouest.org/typedservices/hmmalign.wsdl (download last cached WSDL file)
Contact Info:
Members Responsible for this Service (1)
Favourited By (0)
No one
Similar Services (85)
SOAP Operations (9)
These are the SOAP operations available for the SOAP variant of this service.
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destroy
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getAppConfig
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getAppMetadata
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getJobStatistics
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getOutputAsBase64ByName
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getOutputs
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launchJob
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launchJobBlocking
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queryStatus
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1 input | 1 output
Part of Service: hmmalign
Returns metadata about the application. This includes usage information, along with any number of arbitrary application-specific metadata specified as an array of info elements, e.g. description of the various options that are passed to the application binary.
| Tags on this SOAP Operation: |
none
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1 input | 1 output
Part of Service: hmmalign
Returns basic job statistics including start time, activation time and completion time for a given Job ID.
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none
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1 input | 1 output
Part of Service: hmmalign
Returns the contents of an output file as Base64 binary. The input is a data structure that contains the Job ID for a particular job, and the name of the file to be retrieved.
| Tags on this SOAP Operation: |
none
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1 input | 1 output
Part of Service: hmmalign
returns the outputs from a job that is identified by a Job ID. The output consists of the urls for the standard output and error, and an array of structures representing the output files. The structure contains the name of the output file and the url from where it can be downloaded.
| Tags on this SOAP Operation: |
none
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1 input | 1 output
Part of Service: hmmalign
Requires all the parameters with correct type, and structures representing the input files. The structure contains the name of the input file and either the contents in Base64 encoded binary form or a MIME attachment, or simply a location (URL) to the associated file. The operation returns a Job ID that can be used to retrieve job status and outputs.
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none
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1 input | 1 output
Part of Service: hmmalign
Same as launchJob but blocks until the remote execution is complete, and returns job outputs (as described above) as the response. This operation may only be appropriate for jobs that are not long running.
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none
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1 input | 1 output
Part of Service: hmmalign
Expects a Job ID to query the status of a running job. A status code, message, and URL of the working directory for the job are returned.
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none
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