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Views 1352 Favourites 0 Web Service hmmalign SOAP Fr

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Annotations: 39 Total number of annotations from the provider's definition / description document. 35 Total number of annotations submitted by members of the BioCatalogue. 4 Total number of annotations sourced from other registries. 0

Overview

Provider:
GenOuest

Location:
FRANCE Fr

Submitter / Source:
anthony.bretaudeauFr (over 2 years ago)

Base URL:
http://webservices.genouest.org/opal2/services/hmmalign

WSDL Location:
http://webservices.genouest.org/typedservices/hmmalign.wsdl (download last cached WSDL file)

Documentation URL(s):
None
Description(s):
by anthony.bretaudeau (over 2 years ago)

hmmalign: align sequences to a profile HMM

License(s): Info
None
Cost: Info
No info yet
Usage Conditions: Info
No info yet
Publications: Info
None
Citations: Info
None

Info Members Responsible for this Service (1)

Tags (0)

none

Info Favourited By (0)

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SOAP Operations (9)

These are the SOAP operations available for the SOAP variant of this service. Click on each one to get more information and to annotate.

destroy

1 input | 1 output

Part of Service: hmmalign

Destroys a running job identified by a Job ID.
Tags on this SOAP Operation:
none

getAppConfig

1 input | 1 output

Part of Service: hmmalign

Tags on this SOAP Operation:
none

getAppMetadata

1 input | 1 output

Part of Service: hmmalign

Returns metadata about the application. This includes usage information, along with any number of arbitrary application-specific metadata specified as an array of info elements, e.g. description of the various options that are passed to the application binary.
Tags on this SOAP Operation:
none

getJobStatistics

1 input | 1 output

Part of Service: hmmalign

Returns basic job statistics including start time, activation time and completion time for a given Job ID.
Tags on this SOAP Operation:
none

getOutputAsBase64ByName

1 input | 1 output

Part of Service: hmmalign

Returns the contents of an output file as Base64 binary. The input is a data structure that contains the Job ID for a particular job, and the name of the file to be retrieved.
Tags on this SOAP Operation:
none

getOutputs

1 input | 1 output

Part of Service: hmmalign

returns the outputs from a job that is identified by a Job ID. The output consists of the urls for the standard output and error, and an array of structures representing the output files. The structure contains the name of the output file and the url from where it can be downloaded.
Tags on this SOAP Operation:
none

launchJob

1 input | 1 output

Part of Service: hmmalign

Requires all the parameters with correct type, and structures representing the input files. The structure contains the name of the input file and either the contents in Base64 encoded binary form or a MIME attachment, or simply a location (URL) to the associated file. The operation returns a Job ID that can be used to retrieve job status and outputs.
Tags on this SOAP Operation:
none

launchJobBlocking

1 input | 1 output

Part of Service: hmmalign

Same as launchJob but blocks until the remote execution is complete, and returns job outputs (as described above) as the response. This operation may only be appropriate for jobs that are not long running.
Tags on this SOAP Operation:
none

queryStatus

1 input | 1 output

Part of Service: hmmalign

Expects a Job ID to query the status of a running job. A status code, message, and URL of the working directory for the job are returned.
Tags on this SOAP Operation:
none

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Info Updates from WSDL

WSDL Location: http://webservices.genouest.org/typedservices/hmmalign.wsdl

No updates found yet