cusp SOAP Soaplab

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About Soaplab

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Provider:
European Bioinformatics Institute (EMBL-EBI)

Location:
UNITED KINGDOM

Submitter/Source:
Mike Mayer (over 9 years ago)

Base URL:
http://www.ebi.ac.uk/soaplab/services/nucleic_codon_usage.cusp

WSDL Location:
http://www.ebi.ac.uk/soaplab/services/nucleic_codon_usage.cusp?wsdl(download last cached WSDL file)

Documentation URL(s): None Login to add a documentation URL Description(s): No description(s) yet Login to add a description ELIXIR Description(s): No info yet Login to add an elixir description Details (from Soaplab server): from Soaplab server(over 8 years ago)

  • ds_lsr_analysis :
    • analysis :
      • name : cusp
      • output :
      • installation : Soaplab2 default installation
      • version : 6.3.0
      • type : Nucleic Codon usage
      • description : Create a codon usage table from nucleotide sequence(s)
      • analysis_extension :
      • input :

Show all

  • ds_lsr_analysis :
    • analysis :
      • name : cusp
      • output :
      • installation : Soaplab2 default installation
      • version : 6.3.0
      • type : Nucleic Codon usage
      • description : Create a codon usage table from nucleotide sequence(s)
      • analysis_extension :
        • parameter :
          • data :
            • list :
              • list_item :
                • level : 0
                • value : abi
                • level : 0
                • value : ace
                • level : 0
                • value : acedb
                • level : 0
                • value : bam
                • level : 0
                • value : biomart
                • level : 0
                • value : clustal
                • level : 0
                • value : codata
                • level : 0
                • value : dbid
                • level : 0
                • value : embl
                • level : 0
                • value : ensembl
                • level : 0
                • value : experiment
                • level : 0
                • value : fasta
                • level : 0
                • value : fastq
                • level : 0
                • value : fastq-illumina
                • level : 0
                • value : fastq-sanger
                • level : 0
                • value : fastq-solexa
                • level : 0
                • value : fitch
                • level : 0
                • value : gcg
                • level : 0
                • value : genbank
                • level : 0
                • value : genpept
                • level : 0
                • value : gff2
                • level : 0
                • value : gff3
                • level : 0
                • value : gifasta
                • level : 0
                • value : hennig86
                • level : 0
                • value : ig
                • level : 0
                • value : igstrict
                • level : 0
                • value : jackknifer
                • level : 0
                • value : mase
                • level : 0
                • value : mega
                • level : 0
                • value : msf
                • level : 0
                • value : nbrf
                • level : 0
                • value : nexus
                • level : 0
                • value : pdb
                • level : 0
                • value : pdbnuc
                • level : 0
                • value : pdbnucseq
                • level : 0
                • value : pdbseq
                • level : 0
                • value : pearson
                • level : 0
                • value : phylip
                • level : 0
                • value : phylipnon
                • level : 0
                • value : raw
                • level : 0
                • value : refseqp
                • level : 0
                • value : sam
                • level : 0
                • value : selex
                • level : 0
                • value : staden
                • level : 0
                • value : stockholm
                • level : 0
                • value : strider
                • level : 0
                • value : swiss
                • level : 0
                • value : text
                • level : 0
                • value : treecon
              • type : full
          • base :
          • data :
            • result :
            • iotype : output
          • base :
        • option :
          • name : EDAM:0000107
          • type : normal
          • value : topic Codon usage
          • name : EDAM:0000284
          • type : normal
          • value : operation Codon usage table generation
          • name : emboss
          • type : normal
          • value : true
          • name : installation
          • type : normal
          • value : Soaplab2 default installation
          • name : version
          • type : normal
          • value : 6.3.0
        • app_info :
          • category : nucleic_codon_usage
          • help_url : http://emboss.sourceforge.net/apps/release/6.3/emboss/apps/cusp.html
        • event :
          • action :
          • id : _E_1
      • input :

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