ClustalW2 Phylogeny (REST) REST

Provider:
European Bioinformatics Institute (EMBL-EBI)

Location:
UNITED KINGDOM

Submitter/Source:
EMBL-EBI Support (about 9 years ago)

Base URL:
http://www.ebi.ac.uk/Tools/services/rest/clustalw2_phylogeny

Documentation URL(s): EMBL-EBI Support (about 9 years ago) http://www.ebi.ac.uk/Tools/webservices/services/phylogeny/clustalw2_phylogeny_rest Login to add a documentation URL Description(s): EMBL-EBI Support(about 9 years ago)

Create Neighbor-joining or UPGMA phylogentic trees from a multiple sequence alignment using ClustalW. This service separates the phylogeny features of ClustalW from the multiple sequence alignment functionality (https://www.biocatalogue.org/services/2182).

Login to add a description ELIXIR Description(s): Michael Cornell Curator(over 5 years ago)

Create Neighbor-joining or UPGMA phylogentic trees from a multiple sequence alignment using ClustalW.

Login to add an elixir description License(s): EMBL-EBI Support(over 6 years ago)

This service does not require a license but should be used according to EMBL-EBI’s policies http://www.ebi.ac.uk/about/terms-of-use

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Free.

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E-mail supplied for submission must be a valid e-mail address and no more than 30 concurrent jobs should be submitted at any one time, see http://www.ebi.ac.uk/Tools/webservices/ and the EMBL-EBI Terms of Use: http://www.ebi.ac.uk/about/terms-of-use

Login to add usage conditions info Contact info: EMBL-EBI Support(over 6 years ago)

EMBL-EBI support: http://www.ebi.ac.uk/support/WebServices

Login to add contact info How to cite this service: No info yet Login to add how to cite info Publications about this service: for this service (this can be in a common citation format like Bibtex, MLA or APA, a DOI, a URL, etc.) EMBL-EBI Support(over 6 years ago)

Goujon M., McWilliam H., Li W., Valentin F., Squizzato S., Paern J. and Lopez R (2010) “A new bioinformatics analysis tools framework at EMBL-EBI” Nucleic Acids Res. 38(Web Server issue):W695-9 PMID: 20439314 (http://europepmc.org/abstract/MED/20439314) DOI: 10.1093/nar/gkq313

EMBL-EBI Support(over 6 years ago)

Larkin M.A., Blackshields G., Brown N.P., Chenna R., McGettigan P.A., McWilliam H., Valentin F., Wallace I.M., Wilm A., Lopez R., Thompson J.D., Gibson T.J. and Higgins D.G. (2007) “Clustal W and Clustal X version 2.0.” Bioinformatics 23(21):2947-8. PMID: 17846036 (http://europepmc.org/abstract/MED/17846036) DOI: 10.1093/bioinformatics/btm404

EMBL-EBI Support(over 6 years ago)

McWilliam H., Li W., Uludag M., Squizzato S., Park Y.M., Buso N., Cowley A.P. and Lopez R. (2013) “Analysis Tool Web Services from the EMBL-EBI” Nucleic Acids Res. 41(Web Server issue):W597-600 PMID: 23671338 (http://europepmc.org/abstract/MED/23671338) DOI: 10.1093/nar/gkt376

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