Provider:
European Bioinformatics Institute (EBI)
Location:
United Kingdom
Submitter / Source:
Rodrigo Lopez (about 1 year ago)
Endpoint:
http://www.ebi.ac.uk/Tools/es/ws-servers/WSInterProScan
WSDL Location:
http://www.ebi.ac.uk/Tools/webservices/wsdl/WSInterProScan.wsdl
Documentation URL(s): Franck Tanoh (2 months ago)http://www.ebi.ac.uk/Tools/webservices/services/interproscan
Login to add a documentation URL Description(s): from provider’s description doc (about 1 year ago) WSInterProScan: protein domain and family signature searches (see
http://www.ebi.ac.uk/Tools/webservices/services/interproscan)
joecker (5 days ago)InterProScan runs a lot of tools for protein domain prediction (against different databases). The results are mapped to InterPro identifiers to get additional information and identify same domains in different databases.
Please note that not all protein domains are included in InterPro, but are in the result of InterProScan.
joecker (5 days ago)Please note that some tools in InterProScan use Hidden Markow Models and are therefore very slow.
joecker (5 days ago)The web service can be used in synchronous and asynchronous mode.
Franck Tanoh (1 day ago)InterPro is a database of protein families, domains, regions, repeats and sites in which identifiable features found in known proteins can be applied to new protein sequences. This service allows you to query your protein sequence or protein sequence identifier against InterPro.
Home: http://www.ebi.ac.uk/Tools/InterProScan/
Login to add a description License(s): Franck Tanoh (2 months ago)This service does not require a license but should be used according to EBI’s policies http://www.ebi.ac.uk/Information/termsofuse.html
Login to add license info Cost: Franck Tanoh (2 months ago)free
Login to add cost info Usage Conditions: Franck Tanoh (2 months ago)Users of this service may not submit more than 25 JOBS at a time and may not submit more JOBS until they have obtained results for the last 25. More information on these restrictions can be found at http://www.ebi.ac.uk/Tools/webservices/
Login to add usage conditions info Contact Info: Franck Tanoh (2 months ago)EBI support team: http://www.ebi.ac.uk/support/index.php?query=WebServices
Login to add contact info Publications: for this service. This can be a URI to the publication and/or a DOI. Franck Tanoh (2 months ago)http://nar.oxfordjournals.org/cgi/content/abstract/gkm291v1?ijkey=HLk7PzQHQ2C7dmC&keytype=ref
PMID: 17576686
doi:10.1093/nar/gkm291
Login to add publication info Citations: None Login to add a citation