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G-language REST service REST Jp
Views 68 Favourites 0
aka REST Service for G-language System
Annotations: 7 Total number of annotations from the provider's definition / description document. 0 Total number of annotations submitted by members of the BioCatalogue. 7 Total number of annotations sourced from other registries. 0
by cory (6 days ago)
G-language Genome Analysis Environment (G-language GAE) is a set of Perl libraries for genome sequence analysis that is compatible with BioPerl, equipped with several software interfaces (interactive Perl/UNIX shell with persistent data, AJAX Web GUI, Perl API). The software package contains more than 100 original analysis programs especially focusing on bacterial genome analysis, including those for the identification of binding sites with information theory, analysis of nucleotide composition bias, analysis of the distribution of characteristic oligonucleotides, analysis of codons and prediction of expression levels, and visualization of genomic information. Taking advantage of the BioH...

Provider: Institute for Advanced Biosciences Keio University | Submitter / Source: coryJp (6 days ago)

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Base URL: http://rest.g-language.org | 0 REST Endpoints
PASSED
DDBJ_GIBV REST Jp
Views 49 Favourites 0
Categories:
Annotations: 3 Total number of annotations from the provider's definition / description document. 0 Total number of annotations submitted by members of the BioCatalogue. 3 Total number of annotations sourced from other registries. 0
by Franck Tanoh (2 months ago)
Genome Information Broker for Viruses (GIB-V) is a complete virus genome data repository. Use this service to query the GIB-V database. SOAP variant: http://www.biocatalogue.org/services/19

Provider: DNA Data Bank of Japan (DDBJ) | Submitter / Source: Franck TanohGb (2 months ago)

Tags on this service:
none
Base URL: http://xml.nig.ac.jp/rest/Invoke?service=GIBV | 8 REST Endpoints
PASSED
DDBJ_GTPS REST Jp
Views 53 Favourites 0
Annotations: 5 Total number of annotations from the provider's definition / description document. 0 Total number of annotations submitted by members of the BioCatalogue. 5 Total number of annotations sourced from other registries. 0
by Franck Tanoh (3 months ago)
"GTPS" is acronym of Gene Trek in Procaryote Space. Various complete genomes of eubacteria and archaea have been registered in the International Nucleotide Sequence Databases (INSD) of DDBJ/EMBL/GenBank. The annotation and sequence data are available from GIB (Genome Information Broker; http://gib.genes.nig.ac.jp/).

Provider: DNA Data Bank of Japan (DDBJ) | Submitter / Source: Franck TanohGb (3 months ago)

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Base URL: http://xml.nig.ac.jp/rest/Invoke?service=GTPS | 8 REST Endpoints
PASSED
DDBJ_GTOP REST Jp
Views 67 Favourites 0
Annotations: 4 Total number of annotations from the provider's definition / description document. 0 Total number of annotations submitted by members of the BioCatalogue. 4 Total number of annotations sourced from other registries. 0
by Franck Tanoh (4 months ago)
GTOP is a database built by the Laboratory of Gene-product Informatics at the National Institute of Genetics consisting of data analyses of proteins identified by various genome projects. This database mainly uses sequence homology analyses and features extensive utilization of information on three-dimensional structures. SOAP variant: http://www.biocatalogue.org/services/17

Provider: DNA Data Bank of Japan (DDBJ) | Submitter / Source: Franck TanohGb (4 months ago)

Tags on this service:
none
Base URL: http://xml.nig.ac.jp/rest/Invoke?service=Gtop | 3 REST Endpoints
PASSED
DDBJ_GIB REST Jp
Views 59 Favourites 0
Annotations: 6 Total number of annotations from the provider's definition / description document. 0 Total number of annotations submitted by members of the BioCatalogue. 6 Total number of annotations sourced from other registries. 0
by Franck Tanoh (4 months ago)
GIB (Genome Information Broker) is the comprehensive data repository of complete microbial genomes in the public domain. The service allows you to retrieve data (accession, organism, CDS etc) from GIB. SOAP variant: http://www.biocatalogue.org/services/16

Provider: DNA Data Bank of Japan (DDBJ) | Submitter / Source: Franck TanohGb (4 months ago)

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Base URL: http://xml.nig.ac.jp/rest/Invoke?service=Gib | 11 REST Endpoints
PASSED
DDBJ_BLAST REST Jp
Views 79 Favourites 0
Annotations: 6 Total number of annotations from the provider's definition / description document. 0 Total number of annotations submitted by members of the BioCatalogue. 6 Total number of annotations sourced from other registries. 0
by Franck Tanoh (4 months ago)
Finds regions of similarity between biological sequences by executing BLAST with program, database, a query sequence and options. SOAP variant: http://www.biocatalogue.org/services/8

Provider: DNA Data Bank of Japan (DDBJ) | Submitter / Source: Franck TanohGb (4 months ago)

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Base URL: http://xml.nig.ac.jp/rest/Invoke?service=Blast | 2 REST Endpoints
PASSED
DDBJ_ARSA REST Jp
Views 50 Favourites 0
Categories:
Annotations: 6 Total number of annotations from the provider's definition / description document. 0 Total number of annotations submitted by members of the BioCatalogue. 6 Total number of annotations sourced from other registries. 0
by Franck Tanoh (4 months ago)
Keyword search system against over 20 life sciences databases developed by DDBJ. SOAP variant: http://www.biocatalogue.org/services/12

Provider: DNA Data Bank of Japan (DDBJ) | Submitter / Source: Franck TanohGb (4 months ago)

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Base URL: http://xml.nig.ac.jp/rest/Invoke?service=ARSA | 3 REST Endpoints
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DDBJ_GetEntry REST Jp
Views 110 Favourites 0
Annotations: 9 Total number of annotations from the provider's definition / description document. 0 Total number of annotations submitted by members of the BioCatalogue. 9 Total number of annotations sourced from other registries. 0
by Franck Tanoh (4 months ago)
Provides an easy way to retrieve entries from various databases at DDBJ. SOAP variant: http://www.biocatalogue.org/services/10

Provider: DNA Data Bank of Japan (DDBJ) | Submitter / Source: Franck TanohGb (4 months ago)

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Base URL: http://xml.nig.ac.jp/rest/Invoke?service=GetEntry | 44 REST Endpoints
PASSED
DDBJ_ddbj REST Jp
Views 408 Favourites 0
Annotations: 11 Total number of annotations from the provider's definition / description document. 0 Total number of annotations submitted by members of the BioCatalogue. 11 Total number of annotations sourced from other registries. 0
by Franck Tanoh (4 months ago)
Retrieve DDBJ entry The DNA Data Bank of Japan (DDBJ) is one of three summit databanks that construct DDBJ/EMBL/GenBank International Nucleotide Sequence Database, through close collaboration with EBI in Europe and NCBI in USA. SOAP variant: http://www.biocatalogue.org/services/9

Provider: DNA Data Bank of Japan (DDBJ) | Submitter / Source: Franck TanohGb (4 months ago)

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Base URL: http://xml.nig.ac.jp/rest/Invoke?service=DDBJ | 7 REST Endpoints
PASSED
G-language SOAP Service SOAP Jp
Views 228 Favourites 0
aka GLANG SOAP Service
Annotations: 231 Total number of annotations from the provider's definition / description document. 222 Total number of annotations submitted by members of the BioCatalogue. 9 Total number of annotations sourced from other registries. 0
by cory (5 months ago)
G-language Genome Analysis Environment provides a greater variety of useful genome analysis tools compared to most existing analysis software packages, and is also easily pluggable. This service allows you to utilize over 100 tools from G-language Genome Analysis Environment. See http://www.g-language.org/ for more information about the G-language Genome Analysis Environment.

Provider: Institute for Advanced Biosciences Keio University | Submitter / Source: coryJp (5 months ago)

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WSDL Location: http://soap.g-language.org/g-language.wsdl | 77 SOAP Operations
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