Wollbrett Julien (7 days ago)
takes as input the name of a RICE genotyping study and return all the names of the corresponding DNA samples.
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Service Providers (127)
Submitters (91)
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Annotations: 9
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by Wollbrett Julien (7 days ago)
Wollbrett Julien (7 days ago) |
Provider:
gohelle-cirad-fr
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Submitter / Source:
WSDL Location:
http://gohelle.cirad.fr:8080/testWS/services/GetTropgeneDnaSampleSPARQL?wsdl |
2 SOAP Operations
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89
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Annotations: 10
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by Josh Goodman (about 1 month ago)
Josh Goodman (about 1 month ago)
This service provides access to Chado XML for all data objects that exist in the FlyBase database. Chado XML (http://gmod.org/wiki/Chado_XML) is an XML representation of data from a Chado (http://gmod.org/wiki/Chado) database. Using this service you can fetch anything that has been assigned FBxx ID including genes, alleles, insertions, transcripts, proteins, publications, etc...
The FlyBase Chado XML web service can fetch objects via either primary ID or symbol. It does not fetch objects using secondary IDs or synonyms. If your list contains secondary IDs or synonyms we suggest that you first run your list through our ID Converter tool (http://flybase.org/static_pages/downloads/ID...
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Provider:
flybase-org
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Submitter / Source:
Base URL:
http://flybase.org/chadoxml |
2 REST Endpoints
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60
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aka
http://www.citedin.org
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Annotations: 5
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5
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by Andra Waagmeester (2 months ago)
Andra Waagmeester (2 months ago)
Citedin finds where you are cited! Some of your papers may have been mentioned where you didn't expect that to happen: in blogs, databases, Wikipedia. Citedin finds them all. Through this website you can track various resources citing a PubMed Identifier
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Provider:
Netherlands Bioinformatics Consortium (NBIC)
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Submitter / Source:
Base URL:
http://www.citedin.org |
0 REST Endpoints
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50
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aka
BridgeDb webservice
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Annotations: 10
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10
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by Martijn van Iersel (2 months ago)
Martijn van Iersel (2 months ago)
Identifier mapping service for genes and proteins from multiple species, and for metabolites. Can translate single identifiers, batches of identifiers, look up common names and do a free text search.
See also http://www.biomedcentral.com/1471-2105/11/5
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Provider:
BridgeDb
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Submitter / Source:
Base URL:
http://webservice.bridgedb.org |
3 REST Endpoints
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34
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Annotations: 3
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3
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by Franck Tanoh (2 months ago)
Franck Tanoh (2 months ago)
Genome Information Broker for Viruses (GIB-V) is a complete virus genome data repository. Use this service to query the GIB-V database.
SOAP variant: http://www.biocatalogue.org/services/19
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Provider:
DNA Data Bank of Japan (DDBJ)
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Submitter / Source:
Base URL:
http://xml.nig.ac.jp/rest/Invoke?service=GIBV |
8 REST Endpoints
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47
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Annotations: 5
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by Franck Tanoh (2 months ago)
Franck Tanoh (2 months ago)
"GTPS" is acronym of Gene Trek in Procaryote Space. Various complete genomes of eubacteria and archaea have been registered in the International Nucleotide Sequence Databases (INSD) of DDBJ/EMBL/GenBank. The annotation and sequence data are available from GIB (Genome Information Broker; http://gib.genes.nig.ac.jp/).
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Provider:
DNA Data Bank of Japan (DDBJ)
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Submitter / Source:
Base URL:
http://xml.nig.ac.jp/rest/Invoke?service=GTPS |
8 REST Endpoints
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80
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aka
WSDbfetch
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Annotations: 35
25
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from
provider's description doc
(3 months ago)
provider's description doc
(3 months ago)
WSDbfetch: entry retrieval using entry identifiers or accession numbers for
various biological databases, including EMBL-Bank, InterPro, MEDLINE, Patent
Proteins, PDB, RefSeq, UniParc, UniProtKB and UniRef.
Note: this is an RPC/encoded SOAP interface to the WSDbfetch service, for
other interfaces please see the documentation
(http://www.ebi.ac.uk/Tools/webservices/services/dbfetch).
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Provider:
European Bioinformatics Institute (EBI)
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Submitter / Source:
WSDL Location:
http://www.ebi.ac.uk/ws/services/WSDbfetch?wsdl |
7 SOAP Operations
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48
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Annotations: 15
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15
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Provider:
Centro Nacional de Biotecnologia (National Center for Biotechnology)
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Submitter / Source:
Base URL:
http://biocomp.cnb.csic.es:9000/das/3DEM |
1 REST Endpoint
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139
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Annotations: 43
40
3
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No description(s) yet
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Provider:
National Cancer Research Institute of Genoa, Italy (NCRI)
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Submitter / Source:
WSDL Location:
http://bioinformatics.istge.it:8080/axis/services/cabri.getYeastsById?wsdl |
23 SOAP Operations
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116
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Annotations: 43
40
3
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No description(s) yet
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Provider:
National Cancer Research Institute of Genoa, Italy (NCRI)
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Submitter / Source:
WSDL Location:
http://bioinformatics.istge.it:8080/axis/services/cabri.getYeastIdsByProperty?wsdl |
23 SOAP Operations
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