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Tag "<http://www.mygrid.org.uk/ontology#BLAST_Basic_Local_Alignment_Search_Tool>" returned 14 services

BlastDemo SOAP Jp
Views 70 Favourites 0

This service has been archived because it may not be active anymore (or is close to being non active).

BLAST (DDBJ) SOAP Jp
Views 1057 Favourites 1
Annotations: 215 Total number of annotations from the provider's definition / description document. 42 Total number of annotations submitted by members of the BioCatalogue. 69 Total number of annotations sourced from other registries. 104
by Franck Tanoh (about 1 year ago)
BLAST finds regions of similarity between biological sequences. This service might not be executable when servers for the analysis are busy. In this case, you will receive the following message: 'The search and analysis service is very busy now. Please try it again.'
by dave (6 months ago)
Uses the DDBJ's UniProt BLAST service that forms part of its Web API for Bioinformatics pages.

Provider: DNA Data Bank of Japan (DDBJ) | Submitter / Source: Franck TanohGb (about 1 year ago)

Tags on this service:
WSDL Location: http://xml.nig.ac.jp/wsdl/Blast.wsdl | 8 SOAP Operations
PASSED
TFmodeller SOAP Mx
Views 128 Favourites 1
Annotations: 30 Total number of annotations from the provider's definition / description document. 3 Total number of annotations submitted by members of the BioCatalogue. 15 Total number of annotations sourced from other registries. 12
by Franck Tanoh (about 1 year ago)
The TFmodeller program scans a protein sequence P against a library of protein-DNA complexes and builds comparative models of P if good templates are found. These models are used to get an idea of the P-DNA interface, its evolution and the putative recognised DNA sequences.

Provider: University of Mexico (Center for Genomic Sciences of the National Autonomous) | Submitter / Source: Franck TanohGb (about 1 year ago)

Tags on this service:
WSDL Location: http://maya.ccg.unam.mx:8080/axis/TFmodellerService.jws?WSDL | 1 SOAP Operation
PASSED
BlastbtService SOAP Us
Views 87 Favourites 0

This service has been archived because it may not be active anymore (or is close to being non active).

TimelogicblastService SOAP Us
Views 72 Favourites 0

This service has been archived because it may not be active anymore (or is close to being non active).

BLAST blastp protein similarity search (CNRS IBCP) SOAP Fr
Views 87 Favourites 0
Annotations: 35 Total number of annotations from the provider's definition / description document. 15 Total number of annotations submitted by members of the BioCatalogue. 15 Total number of annotations sourced from other registries. 5
from provider's description doc (3 months ago)
Blast @ IBCP (http://gbio-pbil.ibcp.fr)
by Rodrigo Lopez (about 1 year ago)
Contact: grid@ibcp.fr
by cblanchet (6 months ago)
Description Find local similarity with the BLAST algorithm between a query sequence of protein and a reference database of proteins. Usage You need to provide the following input arguments to the service: “Sequence” : the query sequence “SeqDatabase” : the protein sequence database to compare the query to. The value of this argument should be an identifier get among the ones of the available databases on the remote server (swiss-prot, trembl, pdb). The outputs of the service are: “Status”: the status of the query “JobId”: the JobId in the remote service environment “SeqSimilar”: the sequences similar to th...

Provider: Institut de Biologie et Chimie des Proteines (IBCP) | Submitter / Source: ElotoFr (about 1 year ago)

Tags on this service:
WSDL Location: http://gbio-pbil.ibcp.fr/media/wsdl/BlastWS.wsdl | 4 SOAP Operations
PASSED
WSNCBIBlastService SOAP Gb
Views 200 Favourites 0
aka NCBI BLAST aka WSNCBIBlast
Annotations: 60 Total number of annotations from the provider's definition / description document. 26 Total number of annotations submitted by members of the BioCatalogue. 32 Total number of annotations sourced from other registries. 2
by Rodrigo Lopez (about 1 year ago)
BLAST stands for Basic Local Alignment Search Tool.The emphasis of this tool is to find regions of sequence similarity, which will yield functional and evolutionary clues about the structure and function of your novel sequence.

Provider: European Bioinformatics Institute (EBI) | Submitter / Source: Rodrigo LopezGb (about 1 year ago)

Tags on this service:
WSDL Location: http://www.ebi.ac.uk/Tools/webservices/wsdl/WSNCBIBlast.wsdl | 6 SOAP Operations
PASSED
PSI-BLAST SOAP Gb
Views 83 Favourites 0
aka PSI-BLAST (SOAP)
Annotations: 40 Total number of annotations from the provider's definition / description document. 24 Total number of annotations submitted by members of the BioCatalogue. 16 Total number of annotations sourced from other registries. 0
by Hamish McWilliam (6 months ago)
Position Specific Iterative BLAST (PSI-BLAST) refers to a feature of NCBI BLAST 2.0 in which a position-specific scoring matrix (PSSM) profile is constructed from set of BLAST alignments. The PSSM is then used to search the database in subsequent iterations allowing the detection of distant evolutionary relationships.

Provider: European Bioinformatics Institute (EBI) | Submitter / Source: Hamish McWilliamGb (6 months ago)

Tags on this service:
WSDL Location: http://www.ebi.ac.uk/Tools/services/soap/psiblast?wsdl | 6 SOAP Operations
PASSED
ncbiblast SOAP Gb
Views 125 Favourites 0
aka blast aka blastp aka blastn aka tblastx aka tblastn
Annotations: 40 Total number of annotations from the provider's definition / description document. 24 Total number of annotations submitted by members of the BioCatalogue. 16 Total number of annotations sourced from other registries. 0
by Franck Tanoh (3 months ago)
NCBI BLAST is a sequence similarity search program. The emphasis is to find regions of sequence similarity, which will yield functional and evolutionary clues about the structure and function of the query sequence.

Provider: European Bioinformatics Institute (EBI) | Submitter / Source: Rodrigo LopezGb (about 1 year ago)

Tags on this service:
WSDL Location: http://www.ebi.ac.uk/Tools/services/soap/ncbiblast?wsdl | 6 SOAP Operations
PASSED
WSWUBlastService SOAP Gb
Views 184 Favourites 0
aka WU-BLAST aka WSWUBlast aka WUBlast
Annotations: 93 Total number of annotations from the provider's definition / description document. 68 Total number of annotations submitted by members of the BioCatalogue. 25 Total number of annotations sourced from other registries. 0
by Rodrigo Lopez (about 1 year ago)
WU-BLAST2 stands for Washington University Basic Local Alignment Search Tool Version 2.0. The emphasis of this tool is to find regions of sequence similarity quickly, with minimum loss of sensitivity. This will yield functional and evolutionary clues about the structure and function of your novel sequence. Dr Warren Gish at Washington University released this first "gapped" version of BLAST allowing for gapped alignments and statistics. Contact information: http://www.ebi.ac.uk/support
by Rodrigo Lopez (about 1 year ago)
Input data for this service can be obtained from wsdbfetch (see: http://www.ebi.ac.uk/ws/services/WSDbfetch)

Provider: European Bioinformatics Institute (EBI) | Submitter / Source: Rodrigo LopezGb (about 1 year ago)

Tags on this service:
WSDL Location: http://www.ebi.ac.uk/Tools/webservices/wsdl/WSWUBlast.wsdl | 19 SOAP Operations
PASSED