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Search query "status" returned 192 Services

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KBWS SOAP Jp
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Keio Bioinformatics Web Service (KBWS) is an EMBASSY (EMBOSS associated software) package for accessing popular bioinformatics web services. A list of supported services is available at http://www.g-language.org/kbws/#block-list

Provider: Institute for Advanced Biosciences Keio University | WSDL Location: http://soap.g-language.org/kbws_dl.wsdl

KBWSService SOAP Jp
Categories:
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Keio Bioinformatics Web Service (KBWS) is an EMBASSY (EMBOSS associated software) package for accessing popular bioinformatics web services. A list of supported services is available at http://www.g-language.org/kbws/#block-list

Provider: Institute for Advanced Biosciences Keio University | WSDL Location: http://soap.g-language.org/kbws.wsdl

NCBI BLAST (REST) REST Gb
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NCBI BLAST is a sequence similarity search program. The emphasis is to find regions of sequence similarity, which will yield functional and evolutionary clues about the structure and function of the query sequence. WU-BLAST and NCBI BLAST are distinctly d

Provider: European Bioinformatics Institute (EMBL-EBI) | Base URL: http://www.ebi.ac.uk/Tools/services/rest/ncbiblast

PSI-BLAST (REST) REST Gb
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Position Specific Iterative BLAST (PSI-BLAST) refers to a feature of NCBI BLAST 2.0 in which a position-specific scoring matrix (PSSM) profile is constructed from set of BLAST alignments. The PSSM is then used to search the database in subsequent iteratio

Provider: European Bioinformatics Institute (EMBL-EBI) | Base URL: http://www.ebi.ac.uk/Tools/services/rest/psiblast

PSI-Search (REST) REST Gb
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Similar to PSI-BLAST, PSI-Search uses SSEARCH to perform a rigorous Smith & Waterman search of a protein database. From the results, the significant hits are used to create a position-specific scoring matrix (PSSM) profile using NCBI blastpgp. The profile

Provider: European Bioinformatics Institute (EMBL-EBI) | Base URL: http://www.ebi.ac.uk/Tools/services/rest/psisearch

WU-BLAST (REST) REST Gb
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WU-BLAST stands for Washington University Basic Local Alignment Search Tool. The emphasis of this tool is to find regions of sequence similarity or homology quickly, with minimum loss of sensitivity. This will yield functional and evolutionary clues about

Provider: European Bioinformatics Institute (EMBL-EBI) | Base URL: http://www.ebi.ac.uk/Tools/services/rest/wublast

ClustalW2 (REST) REST Gb
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ClustalW 2 is a general purpose multiple sequence alignment program for DNA or proteins. It produces biologically meaningful multiple sequence alignments of divergent sequences. It calculates the best match for the selected sequences, and lines them up so

Provider: European Bioinformatics Institute (EMBL-EBI) | Base URL: http://www.ebi.ac.uk/Tools/services/rest/clustalw2

DbClustal (REST) REST Gb
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DbClustal is a ClustalW based alignment workflow for sequences identified by a protein BLAST (NCBI BLAST or WU-BLAST) search. Unlike MView the multiple sequence alignment created by DbClustal has the complete sequence of the hits found by BLAST, but with

Provider: European Bioinformatics Institute (EMBL-EBI) | Base URL: http://www.ebi.ac.uk/Tools/services/rest/dbclustal

Kalign (REST) REST Gb
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Kalign is a fast and accurate multiple sequence alignment algorithm for DNA and protein sequences.

Provider: European Bioinformatics Institute (EMBL-EBI) | Base URL: http://www.ebi.ac.uk/Tools/services/rest/kalign

MAFFT (REST) REST Gb
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MAFFT (Multiple Alignment using Fast Fourier Transform) is a high speed multiple sequence alignment program.

Provider: European Bioinformatics Institute (EMBL-EBI) | Base URL: http://www.ebi.ac.uk/Tools/services/rest/mafft

MUSCLE (REST) REST Gb
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MUSCLE (MUltiple Sequence Comparison by Log-Expectation) is claimed to achieve both better average accuracy and better speed than ClustalW or T-Coffee, depending on the chosen options. Multiple alignments of protein sequences are important in many applica

Provider: European Bioinformatics Institute (EMBL-EBI) | Base URL: http://www.ebi.ac.uk/Tools/services/rest/muscle

MView (REST) REST Gb
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MView re-formats the results of a sequence database search (BLAST, FASTA, etc) or a multiple alignment (MSF, PIR, CLUSTAL, etc) adding optional HTML markup to control colouring and web page layout.

Provider: European Bioinformatics Institute (EMBL-EBI) | Base URL: http://www.ebi.ac.uk/Tools/services/rest/mview

T-Coffee (REST) REST Gb
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T-Coffee is a multiple sequence alignment program. The main characteristic of T-Coffee is that it will allow you to combine results obtained with several alignment methods. By default, T-Coffee will compare all you sequences two by two, producing a global

Provider: European Bioinformatics Institute (EMBL-EBI) | Base URL: http://www.ebi.ac.uk/Tools/services/rest/tcoffee

Phobius (REST) REST Gb
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Transmembrane topology and signal peptides prediction from the amino acid sequence of a protein using Phobius.

Provider: European Bioinformatics Institute (EMBL-EBI) | Base URL: http://www.ebi.ac.uk/Tools/services/rest/phobius

ClustalW2 Phylogeny (REST) REST Gb
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Create Neighbor-joining or UPGMA phylogentic trees from a multiple sequence alignment using ClustalW. This service separates the phylogeny features of ClustalW from the multiple sequence alignment functionality (http://www.biocatalogue.org/services/2182).

Provider: European Bioinformatics Institute (EMBL-EBI) | Base URL: http://www.ebi.ac.uk/Tools/services/rest/clustalw2_phylogeny

EMBOSS matcher (REST) REST Gb
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Pairwise sequence alignment of DNA or protein sequences using Waterman-Eggert local alignment.

Provider: European Bioinformatics Institute (EMBL-EBI) | Base URL: http://www.ebi.ac.uk/Tools/services/rest/emboss_matcher

EMBOSS needle (REST) REST Gb
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Pairwise sequence alignment of DNA or protein sequences using Needleman-Wunsch global alignment.

Provider: European Bioinformatics Institute (EMBL-EBI) | Base URL: http://www.ebi.ac.uk/Tools/services/rest/emboss_needle

EMBOSS stretcher (REST) REST Gb
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Pairwise sequence alignment of DNA or protein sequences using Myers and Miller global alignment.

Provider: European Bioinformatics Institute (EMBL-EBI) | Base URL: http://www.ebi.ac.uk/Tools/services/rest/emboss_stretcher

EMBOSS water (REST) REST Gb
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Pairwise sequence alignment of DNA or protein sequences using Smith-Waterman local alignment.

Provider: European Bioinformatics Institute (EMBL-EBI) | Base URL: http://www.ebi.ac.uk/Tools/services/rest/emboss_water