einverted SOAPSoaplab

Cog_error Archived / Deprecated

This service has been archived because it may not be active anymore (or is close to being non active). Please do not use it as it may not be accessible.

Specified Name (from WSDL): AnalysisServiceService |

No alternative names Add_annotation_inactive

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Overview

This looks like a Soaplab service. Click here for more info and guidance on how to use this service

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Provider:
European Bioinformatics Institute (EMBL-EBI)

Location:
UNITED KINGDOM

Submitter/Source:
Mike Mayer (over 9 years ago)

Base URL:
http://www.ebi.ac.uk/soaplab/services/nucleic_repeats.einverted

WSDL Location:
http://www.ebi.ac.uk/soaplab/services/nucleic_repeats.einverted?wsdl (download last cached WSDL file)

Documentation URL(s):

None

Description(s):

No description(s) yet

ELIXIR Description(s): Info

No info yet

Details (from Soaplab server):

from

header=[] body=[Provider's description doc] cssheader=[boxoverTooltipHeader] cssbody=[boxoverTooltipBody] delay=[200]

Soaplab server (over 8 years ago)

ds_lsr_analysis :

analysis :

name : einverted
output :
installation : Soaplab2 default installation
version : 6.3.0
type : Nucleic Repeats, Nucleic 2D structure
description : Finds inverted repeats in nucleotide sequences
analysis_extension :

input :

Show all

ds_lsr_analysis :

analysis :

name : einverted
output :
installation : Soaplab2 default installation
version : 6.3.0
type : Nucleic Repeats, Nucleic 2D structure
description : Finds inverted repeats in nucleotide sequences
analysis_extension :

parameter :
- data :
- base :
- range :
- base :
- range :
- base :
- range :
- base :
- range :
- base :
- data :
- base :
- range :
- base :
- data :
- base :
- standard :
- base :
option :
- name : EDAM:0000157
- type : normal
- value : topic Sequence composition
- name : EDAM:0000278
- type : normal
- value : operation RNA secondary structure prediction
- name : EDAM:0000379
- type : normal
- value : operation Repeat sequence identification
- name : emboss
- type : normal
- value : true
- name : installation
- type : normal
- value : Soaplab2 default installation
- name : version
- type : normal
- value : 6.3.0
app_info :

category : nucleic_repeats
help_url : http://emboss.sourceforge.net/apps/release/6.3/emboss/apps/einverted.html

event :

action :
id : _E_1

input :
- name : gap
- default : 12
- mandatory : false
- type : long
- name : threshold
- default : 50
- mandatory : false
- type : long
- name : match
- default : 3
- mandatory : false
- type : long
- name : mismatch
- default : -4
- mandatory : false
- type : long
- name : maxrepeat
- default : 2000
- mandatory : false
- type : long