EMBOSS ftreedistpair SOAP Soaplab

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Provider:
European Bioinformatics Institute (EMBL-EBI)

Location:
United Kingdom

Submitter/Source:
SoapLab Support (over 11 years ago)

Base URL:
http://www.ebi.ac.uk:80/soaplab/typed/services/phylogeny_consensus.ftreedistpair

WSDL Location:
http://www.ebi.ac.uk/soaplab/typed/services/phylogeny_consensus.ftreedistpair?wsdl(download last cached WSDL file)

Documentation URL(s): SoapLab Support (over 10 years ago) http://emboss.sourceforge.net/apps/release/6.0/emboss/apps/ftreedistpair.html Login to add a documentation URL Description(s): from provider’s description doc (over 10 years ago) Distances between two sets of trees

SoapLab Support(over 10 years ago)

Distances between two sets of trees

Login to add a description ELIXIR Description(s): No info yet Login to add an elixir description Details (from Soaplab server): from Soaplab server(over 10 years ago)

  • ds_lsr_analysis :
    • analysis :
      • name : ftreedistpair
      • installation : Soaplab2 default installation
      • type : Phylogeny Consensus
      • output :
      • description : Distances between two sets of trees
      • version : 6.1.0
      • analysis_extension :
      • input :

Show all

  • ds_lsr_analysis :
    • analysis :
      • name : ftreedistpair
      • installation : Soaplab2 default installation
      • type : Phylogeny Consensus
      • output :
      • description : Distances between two sets of trees
      • version : 6.1.0
      • analysis_extension :
        • option :
          • name : emboss
          • type : normal
          • value : true
          • name : installation
          • type : normal
          • value : Soaplab2 default installation
          • name : version
          • type : normal
          • value : 6.1.0
        • event :
          • action :
          • id : _E_1
        • app_info :
          • category : phylogeny_consensus
          • help_url : http://emboss.sourceforge.net/apps/release/6.1/emboss/apps/ftreedistpair.html
        • parameter :
          • data :
            • ioformat : unspecified
            • iotype : input
            • repeatable :
          • base :
          • data :
            • ioformat : unspecified
            • iotype : input
            • repeatable :
          • base :
          • data :
            • result :
            • iotype : output
          • base :
          • choice_list :
            • separator : ,
            • grouptype : zero_or_more
            • base :
              • name : dtype_s
              • default : false
              • mandatory : false
              • qualifier : s
              • type : boolean
              • prompt : Symmetric difference
              • ordering : 6
              • name : dtype_b
              • default : true
              • mandatory : false
              • qualifier : b
              • type : boolean
              • prompt : Branch score distance
              • ordering : 7
          • base :
          • choice_list :
            • separator : ,
            • grouptype : zero_or_more
            • base :
              • name : pairing_c
              • default : false
              • mandatory : false
              • qualifier : c
              • type : boolean
              • prompt : Distances between corresponding pairs each tree file
              • ordering : 9
              • name : pairing_l
              • default : true
              • mandatory : false
              • qualifier : l
              • type : boolean
              • prompt : Distances between all possible pairs in each tree file
              • ordering : 10
          • base :
          • choice_list :
            • separator : ,
            • grouptype : zero_or_more
            • base :
              • name : style_f
              • default : false
              • mandatory : false
              • qualifier : f
              • type : boolean
              • prompt : Full_matrix
              • ordering : 12
              • name : style_v
              • default : true
              • mandatory : false
              • qualifier : v
              • type : boolean
              • prompt : One pair per line, verbose
              • ordering : 13
              • name : style_s
              • default : false
              • mandatory : false
              • qualifier : s
              • type : boolean
              • prompt : One pair per line, sparese
              • ordering : 14
          • base :
          • base :
            • name : noroot
            • default : false
            • mandatory : false
            • qualifier : noroot
            • prompt : Trees to be treated as rooted
            • type : boolean
            • ordering : 15
          • range :
            • format : %d
            • min : 0
            • repeatable :
          • base :
            • name : outgrno
            • default : 0
            • mandatory : false
            • qualifier : outgrno
            • prompt : Species number to use as outgroup
            • type : long
            • ordering : 16
          • base :
            • name : progress
            • default : false
            • mandatory : false
            • qualifier : progress
            • prompt : Print indications of progress of run
            • type : boolean
            • ordering : 20
      • input :
        • name : dtype_s
        • default : false
        • mandatory : false
        • type : boolean
        • name : dtype_b
        • default : true
        • mandatory : false
        • type : boolean
        • name : pairing_c
        • default : false
        • mandatory : false
        • type : boolean
        • name : pairing_l
        • default : true
        • mandatory : false
        • type : boolean
        • name : style_f
        • default : false
        • mandatory : false
        • type : boolean
        • name : style_v
        • default : true
        • mandatory : false
        • type : boolean
        • name : style_s
        • default : false
        • mandatory : false
        • type : boolean
        • name : noroot
        • default : false
        • mandatory : false
        • type : boolean
        • name : outgrno
        • default : 0
        • mandatory : false
        • type : long
        • name : progress
        • default : false
        • mandatory : false
        • type : boolean

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