Member of BioCatalogue ProDom team

Hogenom SOAP Fr
Categories:
PASSED
HOGENOM is a database of homologous genes from fully sequenced organisms, structured under ACNUC sequence database management system. It allows to select sets of homologous genes among species,

Provider: PRABI - Rhone-Alpes Bioinformatics Center | WSDL Location: http://prodom.prabi.fr/prodom/2006.1/wsdl/hogenom.wsdl

MkDom2 SOAP Fr
PASSED
MkDom2 is the program used routinely to build each new release of ProDom. The algorithm relies on the assumption that the shortest amino acid sequence corresponds to a single domain, and may be used as a query to scree

Provider: PRABI - Rhone-Alpes Bioinformatics Center | WSDL Location: http://prodom.prabi.fr/prodom/current/wsdl/essairunmkdom.wsdl

ProDomCG_evoscen SOAP Fr
Categories:
WARNING
ProdomCG_evoscen is a set of webservices allowing to browse ProDom-CG267 evolutionary scenarios. It includes
  • GetScenarioProdom : takes an ProDom-CG family (CG + 6 characters) and returns its evolutionary scenario as a string of (number of nodes)

Provider: PRABI - Rhone-Alpes Bioinformatics Center | WSDL Location: http://prodom.prabi.fr/prodom/2006.1/wsdl/prodomCG_evoscen.wsdl

ProDomCG_tree SOAP Fr
PASSED
ProdomCG_tree is a set of webservices allowing to browse ProDom-CG267 phylogenetic tree. It includes
  • NearestNodeProdom : takes an NCBI taxID and returns the closest taxID present in ProdomCG
  • GetParentProdom : takes a taxID present in Pr

Provider: PRABI - Rhone-Alpes Bioinformatics Center | WSDL Location: http://prodom.prabi.fr/prodom/2006.1/wsdl/prodomCG_tree.wsdl

Hogenom_evoscen SOAP Fr
Categories:
WARNING
Hogenom_evoscen is a set of webservices allowing to browse Hogenom 4 evolutionary scenarios. It includes
  • GetScenarioHogenom : takes an Hogenom family (HBG + 6 digits) and returns its evolutionary scenario as a string of (number of nodes) charact

Provider: PRABI - Rhone-Alpes Bioinformatics Center | WSDL Location: http://prodom.prabi.fr/prodom/2006.1/wsdl/hogenom_evoscen.wsdl

Hogenom_tree SOAP Fr
WARNING
Hogenom_tree is a set of webservices allowing to browse Hogenom 4 phylogenetic tree. It includes
  • NearestNodeHogenom : takes an NCBI taxID and returns the closest taxID present in Hogenom
  • GetParentHogenom : takes a taxID present

Provider: PRABI - Rhone-Alpes Bioinformatics Center | WSDL Location: http://prodom.prabi.fr/prodom/current/wsdl/hogenom_tree.wsdl