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Views 557 Favourites 0 Web Service Phobius (REST) REST Gb

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Annotations: 16 Total number of annotations from the provider's definition / description document. 0 Total number of annotations submitted by members of the BioCatalogue. 16 Total number of annotations sourced from other registries. 0

Overview

Provider:
European Bioinformatics Institute (EBI)

Location:
UNITED KINGDOM Gb

Submitter / Source:
EMBL-EBI SupportGb (about 1 year ago)

Base URL:
http://www.ebi.ac.uk/Tools/services/rest/phobius

Description(s):
by EMBL-EBI Support (about 1 year ago)

Transmembrane topology and signal peptides prediction from the amino acid sequence of a protein using Phobius.

License(s): Info
by EMBL-EBI Support (about 1 year ago)
Cost: Info
by EMBL-EBI Support (about 1 year ago)

Free.

Usage Conditions: Info
by EMBL-EBI Support (about 1 year ago)

E-mail supplied for submission must be a valid e-mail address and no more than 25 concurrent jobs should be submitted at any one time, see http://www.ebi.ac.uk/Tools/webservices/about/webservices and the EMBL-EBI Terms of Use: http://www.ebi.ac.uk/Informa

Publications: Info
by EMBL-EBI Support (about 1 year ago)

Goujon M., McWilliam H., Li W., Valentin F., Squizzato S., Paern J. and Lopez R. (2010)
"A new bioinformatics analysis tools framework at EMBL-EBI."
Nucleic Acids Res. 38:W695-9
PMID: 20439314 (http://www.ebi.ac.uk/citexplore/citationDetails.do?externalId

by EMBL-EBI Support (about 1 year ago)

Käll L., Krogh A. and Sonnhammer E.L. (2004)
"A combined transmembrane topology and signal peptide prediction method."
Journal of Molecular Biology 338(5):1027-36
PubMed: 15111065 (http://www.ebi.ac.uk/citexplore/citationDetails.do?externalId=15111065&dat

Citations: Info
None

Info Members Responsible for this Service (1)

Info Favourited By (0)

No one

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REST Endpoints (6)

Quick Browse | GET /parameterdetails/{parameterId} | GET /parameters | GET /result/{jobId}/{resultType} | GET /status/{jobId} | GET /resulttypes/{jobId} | POST /run |

GET /parameterdetails/{parameterId}

Part of Service: Phobius (REST)

Part of Endpoint Group: none

Template: Help_icon http://www.ebi.ac.uk/Tools/services/rest/phobius/parameterdetails/{parameterId}

by EMBL-EBI Support (about 1 year ago)
Get detailed information about a parameter.
Tags on this endpoint:
none

GET /parameters

Part of Service: Phobius (REST)

Part of Endpoint Group: none

Template: Help_icon http://www.ebi.ac.uk/Tools/services/rest/phobius/parameters

by EMBL-EBI Support (about 1 year ago)
List parameter names.
Tags on this endpoint:
none

GET /result/{jobId}/{resultType}

Part of Service: Phobius (REST)

Part of Endpoint Group: none

Template: Help_icon http://www.ebi.ac.uk/Tools/services/rest/phobius/result/{jobId}/{resultType}

by EMBL-EBI Support (about 1 year ago)
Get the job result of the specified type.
Tags on this endpoint:
none

GET /status/{jobId}

Part of Service: Phobius (REST)

Part of Endpoint Group: none

Template: Help_icon http://www.ebi.ac.uk/Tools/services/rest/phobius/status/{jobId}

by EMBL-EBI Support (about 1 year ago)
Get the status of a submitted job.
Tags on this endpoint:
none

GET /resulttypes/{jobId}

Part of Service: Phobius (REST)

Part of Endpoint Group: none

Template: Help_icon http://www.ebi.ac.uk/Tools/services/rest/phobius/resulttypes/{jobId}

by EMBL-EBI Support (about 1 year ago)
Get available result types for a finished job.
Tags on this endpoint:
none

POST /run

Part of Service: Phobius (REST)

Part of Endpoint Group: none

Template: Help_icon http://www.ebi.ac.uk/Tools/services/rest/phobius/run

by EMBL-EBI Support (about 1 year ago)
Submit a job with the specified parameters.
Tags on this endpoint:
none

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