2242 1 WSInterProScan SOAP

http://www.ebi.ac.uk/Tools/webservices/services/interproscan

WSInterProScan: protein domain and family signature searches (see http://www.ebi.ac.uk/Tools/webservices/services/interproscan).
Note: this RPC/encoded SOAP service was decommissioned on Monday 28th March 2011, see http://www.ebi.ac.uk/Tools/webservices/services/interproscan for details of alternative REST and document/literal SOAP services.

InterProScan runs a lot of tools for protein domain prediction (against different databases). The results are mapped to InterPro identifiers to get additional information and identify same domains in different databases.
Please note that not all protein d

Please note that some tools in InterProScan use Hidden Markow Models and are therefore very slow.

The web service can be used in synchronous and asynchronous mode.

InterPro is a database of protein families, domains, regions, repeats and sites in which identifiable features found in known proteins can be applied to new protein sequences. This service allows you to query your protein sequence or protein sequence iden

The WSInterProScan RPC/encoded SOAP service is deprecated, and due to be decommissioned on Monday 28th March 2011.

Please use the following services instead:
InterProScan (REST): http://www.biocatalogue.org/services/2769
InterProScan (SOAP): http://w

This service does not require a license but should be used according to EBI's policies http://www.ebi.ac.uk/Information/termsofuse.html

free

Users of this service may not submit more than 25 JOBS at a time and may not submit more JOBS until they have obtained results for the last 25. More information on these restrictions can be found at http://www.ebi.ac.uk/Tools/webservices/

E-mail supplied for submission must be a valid e-mail address and no more than 25 concurrent jobs should be submitted at any one time, see http://www.ebi.ac.uk/Tools/webservices/about/webservices and the EMBL-EBI Terms of Use: http://www.ebi.ac.uk/Informa

EBI support team: http://www.ebi.ac.uk/support/index.php?query=WebServices

http://nar.oxfordjournals.org/cgi/content/abstract/gkm291v1?ijkey=HLk7PzQHQ2C7dmC&keytype=ref

PMID: 17576686

doi:10.1093/nar/gkm291

Quevillon E., Silventoinen V., Pillai S., Harte N., Mulder N., Apweiler R. and Lopez R. (2005)
"InterProScan: protein domains identifier."
Nucleic Acids Res. 33(Web Server issue):W116-20.
PMID: 15980438 http://www.ebi.ac.uk/citexplore/citationDetails.d

McWilliam H., Valentin F., Goujon M., Li W., Narayanasamy M., Martin J., Miyar T. and Lopez R. (2009)
"Web services at the European Bioinformatics Institute-2009."
Nucleic Acids Res. 37(Web Server issue):W6-10.
PMID: 19435877 http://www.ebi.ac.uk/citex