tBLASTx at SIB (nucleotide query sequence(s) against a nucleotide sequence dabase, both six-frame translated) SOAP

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European Molecular Biology Network (EMBnet)

European Union

Submitter / Source:
smoretti (about 1 year ago)

Base URL:

WSDL Location:
http://wsembnet.vital-it.ch/soaplab2/services/embnet.tblastx?wsdl(download last cached WSDL file)

Documentation URL(s): smoretti (9 months ago)http://ch.embnet.org/software/aBLAST.html

Login to add a documentation URL Description(s): smoretti (9 months ago)tBLASTx finds regions of similarity between the six-frame translations of a nucleotide query sequence and the six-frame translations of a nucleotide sequence database.
Computations are done on the Vital-IT cluster (SIB).
Most NCBI BLAST (2.2.17) options are available.
Most SIB databases are available: STS, EST, HTG, refseq, repbase, …

INPUT: nucleotide sequence(s) + choose a database

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