sixpack SOAPSoaplab

Cog_error Archived / Deprecated

This service has been archived because it may not be active anymore (or is close to being non active). Please do not use it as it may not be accessible.

Specified Name (from WSDL): AnalysisServiceService |

No alternative names Add_annotation_inactive

Categories:

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Overview

This looks like a Soaplab service. Click here for more info and guidance on how to use this service

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Provider:
European Bioinformatics Institute (EMBL-EBI)

Location:
UNITED KINGDOM

Submitter/Source:
Mike Mayer (almost 10 years ago)

Base URL:
http://www.ebi.ac.uk/soaplab/services/nucleic_translation.sixpack

WSDL Location:
http://www.ebi.ac.uk/soaplab/services/nucleic_translation.sixpack?wsdl (download last cached WSDL file)

Documentation URL(s):

None

Description(s):

No description(s) yet

ELIXIR Description(s): Info

No info yet

Details (from Soaplab server):

from

header=[] body=[Provider's description doc] cssheader=[boxoverTooltipHeader] cssbody=[boxoverTooltipBody] delay=[200]

Soaplab server (over 8 years ago)

ds_lsr_analysis :

analysis :

name : sixpack
output :
installation : Soaplab2 default installation
version : 6.3.0
type : Display, Nucleic Gene finding, Nucleic Translation
description : Display a DNA sequence with 6-frame translation and ORFs
analysis_extension :

input :

Show all

ds_lsr_analysis :

analysis :

name : sixpack
output :
installation : Soaplab2 default installation
version : 6.3.0
type : Display, Nucleic Gene finding, Nucleic Translation
description : Display a DNA sequence with 6-frame translation and ORFs
analysis_extension :

parameter :
- data :
- base :
- data :
- base :
- standard :
- base :
- base :
- base :
- base :
- data :
- base :
- base :
- range :
- base :
- standard :
- base :
- standard :
- base :
- base :
- range :
- base :
- range :
- base :
- range :
- base :
- base :
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- range :
- base :
- base :
- standard :
- base :
option :
- name : EDAM:0000108
- type : normal
- value : topic Transcription and translation
- name : EDAM:0000371
- type : normal
- value : operation DNA translation
- name : EDAM:0000436
- type : normal
- value : operation Coding region prediction
- name : EDAM:0000564
- type : normal
- value : operation Sequence visualisation
- name : emboss
- type : normal
- value : true
- name : installation
- type : normal
- value : Soaplab2 default installation
- name : version
- type : normal
- value : 6.3.0
app_info :

category : display
help_url : http://emboss.sourceforge.net/apps/release/6.3/emboss/apps/sixpack.html

event :

action :
id : _E_1

input :
- name : firstorf
- default : false
- mandatory : false
- type : boolean
- name : lastorf
- default : false
- mandatory : false
- type : boolean
- name : mstart
- default : false
- mandatory : false
- type : boolean
- name : reverse
- default : false
- mandatory : false
- type : boolean
- name : orfminsize
- default : 1
- mandatory : false
- type : long
- name : number
- default : false
- mandatory : false
- type : boolean
- name : width
- default : 60
- mandatory : false
- type : long
- name : length
- default : 0
- mandatory : false
- type : long
- name : margin
- default : 10
- mandatory : false
- type : long
- name : name
- default : false
- mandatory : false
- type : boolean
- name : description
- default : false
- mandatory : false
- type : boolean
- name : offset
- default : 1
- mandatory : false
- type : long
- name : html
- default : false
- mandatory : false
- type : boolean