Web Service DbClustal (REST) REST Gb

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Annotations: 20 Total number of annotations from the provider's definition / description document. 0 Total number of annotations submitted by members of BioCatalogue. 20 Total number of annotations sourced from other registries. 0

Overview

Provider:
European Bioinformatics Institute (EMBL-EBI)

Location:
UNITED KINGDOM Gb

Submitter/Source:
EMBL-EBI SupportGb (over 7 years ago)

Base URL:
http://www.ebi.ac.uk/Tools/services/rest/dbclustal

Description(s):
by EMBL-EBI Support (over 7 years ago)

DbClustal is a ClustalW based alignment workflow for sequences identified by a protein BLAST (NCBI BLAST or WU-BLAST) search. Unlike MView the multiple sequence alignment created by DbClustal has the complete sequence of the hits found by BLAST, but with

ELIXIR Description(s): Info
by Michael Cornell Curator(about 4 years ago)

ClustalW 2 is a general purpose multiple sequence alignment program for DNA or proteins. It produces biologically meaningful multiple sequence alignments of divergent sequences.

License(s): Info
by EMBL-EBI Support (over 7 years ago)
Cost: Info
by EMBL-EBI Support (over 7 years ago)

Free.

Usage conditions: Info
by EMBL-EBI Support (over 7 years ago)

E-mail supplied for submission must be a valid e-mail address and no more than 25 concurrent jobs should be submitted at any one time, see http://www.ebi.ac.uk/Tools/webservices/about/webservices and the EMBL-EBI Terms of Use: http://www.ebi.ac.uk/Informa

Contact info: Info
by EMBL-EBI Support (over 7 years ago)
by Michael Cornell Curator(about 4 years ago)
How to cite this service: Info
No info yet
Publications about this service: Info
by EMBL-EBI Support (over 7 years ago)

Thompson J.D., Plewniak F., Thierry J. and Poch O. (2000) “DbClustal: rapid and reliable global multiple alignments of protein sequences detected by database searches.” Nucleic Acids Research 28(15):2919-26 PMID: 10908355 (http://www.ebi.ac.uk/citexplore/

by EMBL-EBI Support (over 7 years ago)

Goujon M., McWilliam H., Li W., Valentin F., Squizzato S., Paern J. and Lopez R. (2010) “A new bioinformatics analysis tools framework at EMBL-EBI.” Nucleic Acids Res. 38:W695-9 PMID: 20439314 (http://www.ebi.ac.uk/citexplore/citationDetails.do?externalId

Citations of this service: Info
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Example workflows using this service: Info
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