Web Service MUSCLE (REST) REST Gb

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Annotations: 22 Total number of annotations from the provider's definition / description document. 0 Total number of annotations submitted by members of BioCatalogue. 22 Total number of annotations sourced from other registries. 0

Overview

Provider:
European Bioinformatics Institute (EMBL-EBI)

Location:
UNITED KINGDOM Gb

Submitter/Source:
EMBL-EBI SupportGb (about 7 years ago)

Base URL:
http://www.ebi.ac.uk/Tools/services/rest/muscle

Description(s):
by EMBL-EBI Support (about 7 years ago)

MUSCLE (MUltiple Sequence Comparison by Log-Expectation) is claimed to achieve both better average accuracy and better speed than ClustalW or T-Coffee, depending on the chosen options. Multiple alignments of protein sequences are important in many applica

ELIXIR Description(s): Info
by Michael Cornell Curator(over 3 years ago)

MUSCLE (MUltiple Sequence Comparison by Log-Expectation) multiple sequence alignment tool.

License(s): Info
by EMBL-EBI Support (about 7 years ago)
Cost: Info
by EMBL-EBI Support (about 7 years ago)

Free.

Usage conditions: Info
by EMBL-EBI Support (about 7 years ago)

E-mail supplied for submission must be a valid e-mail address and no more than 25 concurrent jobs should be submitted at any one time, see http://www.ebi.ac.uk/Tools/webservices/about/webservices and the EMBL-EBI Terms of Use: http://www.ebi.ac.uk/Informa

Contact info: Info
by EMBL-EBI Support (about 7 years ago)
by Michael Cornell Curator(over 3 years ago)
How to cite this service: Info
No info yet
Publications about this service: Info
by EMBL-EBI Support (about 7 years ago)

Goujon M., McWilliam H., Li W., Valentin F., Squizzato S., Paern J. and Lopez R. (2010) “A new bioinformatics analysis tools framework at EMBL-EBI.” Nucleic Acids Res. 38:W695-9 PMID: 20439314 (http://www.ebi.ac.uk/citexplore/citationDetails.do?externalId

by EMBL-EBI Support (about 7 years ago)

Edgar R.C. (2004) “MUSCLE: multiple sequence alignment with high accuracy and high throughput.” Nucleic Acids Res. 32(5):1792-7. PMID: 15034147 (http://www.ebi.ac.uk/citexplore/citationDetails.do?externalId=15034147&dataSource=MED) DOI: 10.1093/nar/gkh340

Citations of this service: Info
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Example workflows using this service: Info
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