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Overview
Provider:
European Bioinformatics Institute (EMBL-EBI)
Location:
UNITED KINGDOM
Submitter/Source:
EMBL-EBI Support
(over 9 years ago)
Base URL:
http://www.ebi.ac.uk/Tools/services/rest/clustalw2_phylogeny
![header=[] body=[Member] cssheader=[boxoverTooltipHeader] cssbody=[boxoverTooltipBody] delay=[200]](/assets/user-640ae220771289ec897691747ffd93bf.png)
Create Neighbor-joining or UPGMA phylogentic trees from a multiple sequence alignment using ClustalW. This service separates the phylogeny features of ClustalW from the multiple sequence alignment functionality (http://www.biocatalogue.org/services/2182).
![header=[] body=[An ELIXIR Description must be a short (maximum of 2 sentences), succinct description of the Webservice. It should no contain links or be overly technical. If you are unsure, this should be left blank.] cssheader=[boxoverTooltipHeader] cssbody=[boxoverTooltipBody] delay=[200] Info](/assets/info-092c542cd75fb00e5270a8b7c81dc616.png)
![header=[] body=[Member] cssheader=[boxoverTooltipHeader] cssbody=[boxoverTooltipBody] delay=[200]](/assets/user-640ae220771289ec897691747ffd93bf.png)
Create Neighbor-joining or UPGMA phylogentic trees from a multiple sequence alignment using ClustalW.
![header=[] body=[What are the license(s) that people using this service have to adhere to? For now you can mention the specific license(s) and/or provide URL(s).] cssheader=[boxoverTooltipHeader] cssbody=[boxoverTooltipBody] delay=[200] Info](/assets/info-092c542cd75fb00e5270a8b7c81dc616.png)
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This service does not require a license but should be used according to EMBL-EBI’s policies http://www.ebi.ac.uk/about/terms-of-use
![header=[] body=[What are the usage conditions on this service? For example: not allowed more than 2 requests per minute and 100 requests per hour.] cssheader=[boxoverTooltipHeader] cssbody=[boxoverTooltipBody] delay=[200] Info](/assets/info-092c542cd75fb00e5270a8b7c81dc616.png)
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E-mail supplied for submission must be a valid e-mail address and no more than 30 concurrent jobs should be submitted at any one time, see http://www.ebi.ac.uk/Tools/webservices/ and the EMBL-EBI Terms of Use: http://www.ebi.ac.uk/about/terms-of-use
![header=[] body=[Who can be contacted about this Service Deployment?] cssheader=[boxoverTooltipHeader] cssbody=[boxoverTooltipBody] delay=[200] Info](/assets/info-092c542cd75fb00e5270a8b7c81dc616.png)
![header=[] body=[What papers have been published <b>for</b> this service (this can be in a common citation format like Bibtex, MLA or APA, a DOI, a URL, etc.)] cssheader=[boxoverTooltipHeader] cssbody=[boxoverTooltipBody] delay=[200] Info](/assets/info-092c542cd75fb00e5270a8b7c81dc616.png)
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Goujon M., McWilliam H., Li W., Valentin F., Squizzato S., Paern J. and Lopez R (2010) “A new bioinformatics analysis tools framework at EMBL-EBI” Nucleic Acids Res. 38(Web Server issue):W695-9 PMID: 20439314 (http://europepmc.org/abstract/MED/20439314) DOI: 10.1093/nar/gkq313
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Larkin M.A., Blackshields G., Brown N.P., Chenna R., McGettigan P.A., McWilliam H., Valentin F., Wallace I.M., Wilm A., Lopez R., Thompson J.D., Gibson T.J. and Higgins D.G. (2007) “Clustal W and Clustal X version 2.0.” Bioinformatics 23(21):2947-8. PMID: 17846036 (http://europepmc.org/abstract/MED/17846036) DOI: 10.1093/bioinformatics/btm404
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McWilliam H., Li W., Uludag M., Squizzato S., Park Y.M., Buso N., Cowley A.P. and Lopez R. (2013) “Analysis Tool Web Services from the EMBL-EBI” Nucleic Acids Res. 41(Web Server issue):W597-600 PMID: 23671338 (http://europepmc.org/abstract/MED/23671338) DOI: 10.1093/nar/gkt376
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