FingerPRINTScan (SOAP) SOAP

Identify the closest matching sequence motif fingerprints in the PRINTS database (http://www.bioinf.manchester.ac.uk/dbbrowser/PRINTS/) which appear in a protein sequence.

Identify the closest matching sequence motif fingerprints in the PRINTS database which appear in a protein sequence.

This service does not require a license but should be used according to EMBL-EBI’s policies http://www.ebi.ac.uk/about/terms-of-use

Free.

E-mail supplied for submission must be a valid e-mail address and no more than 30 concurrent jobs should be submitted at any one time, see http://www.ebi.ac.uk/Tools/webservices/ and the EMBL-EBI Terms of Use: http://www.ebi.ac.uk/about/terms-of-use

EMBL-EBI support: http://www.ebi.ac.uk/support/WebServices

Goujon M., McWilliam H., Li W., Valentin F., Squizzato S., Paern J. and Lopez R (2010) “A new bioinformatics analysis tools framework at EMBL-EBI” Nucleic Acids Res. 38(Web Server issue):W695-9 PMID: 20439314 (http://europepmc.org/abstract/MED/20439314) DOI: 10.1093/nar/gkq313

Scordis P., Flower D.R. & Attwood T.K. (1999) “FingerPRINTScan: Intelligent searching of the PRINTS motif database.” Bioinformatics, 15(10):799-806. PMID: 10705433 (http://europepmc.org/abstract/MED/10705433) DOI: 10.1093/bioinformatics/15.10.799

McWilliam H., Li W., Uludag M., Squizzato S., Park Y.M., Buso N., Cowley A.P. and Lopez R. (2013) “Analysis Tool Web Services from the EMBL-EBI” Nucleic Acids Res. 41(Web Server issue):W597-600 PMID: 23671338 (http://europepmc.org/abstract/MED/23671338) DOI: 10.1093/nar/gkt376