![header=[] body=[Member] cssheader=[boxoverTooltipHeader] cssbody=[boxoverTooltipBody] delay=[200]](/assets/user-640ae220771289ec897691747ffd93bf.png)
Specified Name (from WSDL):
JDispatcherService
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No alternative names
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Overview
Provider:
European Bioinformatics Institute (EMBL-EBI)
Location:
UNITED KINGDOM
Submitter/Source:
EMBL-EBI Support
(over 5 years ago)
Base URL:
http://www.ebi.ac.uk/Tools/services/soap/hmmer_hmmscan
WSDL Location:
http://www.ebi.ac.uk/Tools/services/soap/hmmer_hmmscan?wsdl (download last cached WSDL file)
![header=[] body=[Member] cssheader=[boxoverTooltipHeader] cssbody=[boxoverTooltipBody] delay=[200]](/assets/user-640ae220771289ec897691747ffd93bf.png)
Scan a database of HMM protein signatures (e.g. Pfam or TreeFam) with a protein sequence.
![header=[] body=[An ELIXIR Description must be a short (maximum of 2 sentences), succinct description of the Webservice. It should no contain links or be overly technical. If you are unsure, this should be left blank.] cssheader=[boxoverTooltipHeader] cssbody=[boxoverTooltipBody] delay=[200] Info](/assets/info-092c542cd75fb00e5270a8b7c81dc616.png)
![header=[] body=[Member] cssheader=[boxoverTooltipHeader] cssbody=[boxoverTooltipBody] delay=[200]](/assets/user-640ae220771289ec897691747ffd93bf.png)
Scan a database of HMM protein signatures (e.g. Pfam or TreeFam) with a protein sequence.
![header=[] body=[What are the license(s) that people using this service have to adhere to? For now you can mention the specific license(s) and/or provide URL(s).] cssheader=[boxoverTooltipHeader] cssbody=[boxoverTooltipBody] delay=[200] Info](/assets/info-092c542cd75fb00e5270a8b7c81dc616.png)
![header=[] body=[Member] cssheader=[boxoverTooltipHeader] cssbody=[boxoverTooltipBody] delay=[200]](/assets/user-640ae220771289ec897691747ffd93bf.png)
This service does not require a license but should be used according to EMBL-EBI’s policies http://www.ebi.ac.uk/about/terms-of-use
![header=[] body=[What are the usage conditions on this service? For example: not allowed more than 2 requests per minute and 100 requests per hour.] cssheader=[boxoverTooltipHeader] cssbody=[boxoverTooltipBody] delay=[200] Info](/assets/info-092c542cd75fb00e5270a8b7c81dc616.png)
![header=[] body=[Member] cssheader=[boxoverTooltipHeader] cssbody=[boxoverTooltipBody] delay=[200]](/assets/user-640ae220771289ec897691747ffd93bf.png)
E-mail supplied for submission must be a valid e-mail address and no more than 30 concurrent jobs should be submitted at any one time, see http://www.ebi.ac.uk/Tools/webservices/ and the EMBL-EBI Terms of Use: http://www.ebi.ac.uk/about/terms-of-use
![header=[] body=[Who can be contacted about this Service Deployment?] cssheader=[boxoverTooltipHeader] cssbody=[boxoverTooltipBody] delay=[200] Info](/assets/info-092c542cd75fb00e5270a8b7c81dc616.png)
![header=[] body=[What papers have been published <b>for</b> this service (this can be in a common citation format like Bibtex, MLA or APA, a DOI, a URL, etc.)] cssheader=[boxoverTooltipHeader] cssbody=[boxoverTooltipBody] delay=[200] Info](/assets/info-092c542cd75fb00e5270a8b7c81dc616.png)
![header=[] body=[Member] cssheader=[boxoverTooltipHeader] cssbody=[boxoverTooltipBody] delay=[200]](/assets/user-640ae220771289ec897691747ffd93bf.png)
Goujon M., McWilliam H., Li W., Valentin F., Squizzato S., Paern J. and Lopez R. (2010) “A new bioinformatics analysis tools framework at EMBL-EBI.” Nucleic Acids Res. 38:W695-9 PMID: 20439314 (http://europepmc.org/abstract/MED/20439314) DOI: 10.1093/nar/gkq313 (http://dx.doi.org/10.1093/nar/gkq313)
![header=[] body=[Member] cssheader=[boxoverTooltipHeader] cssbody=[boxoverTooltipBody] delay=[200]](/assets/user-640ae220771289ec897691747ffd93bf.png)
Eddy S.R. (2011) “Accelerated Profile HMM Searches” PLoS Computational Biology 7(10):e1002195 PMID: 22039361 (http://europepmc.org/abstract/MED/22039361) DOI: 10.1371/journal.pcbi.1002195
![header=[] body=[Member] cssheader=[boxoverTooltipHeader] cssbody=[boxoverTooltipBody] delay=[200]](/assets/user-640ae220771289ec897691747ffd93bf.png)
McWilliam H., Li W., Uludag M., Squizzato S., Park Y.M., Buso N., Cowley A.P. and Lopez R. (2013) “Analysis Tool Web Services from the EMBL-EBI” Nucleic Acids Res. 41(Web Server issue):W597-600 PMID: 23671338 (http://europepmc.org/abstract/MED/23671338) DOI: 10.1093/nar/gkt376
![header=[] body=[Example workflows that utilize this service (e.g. a link to a workflow on myExperiment)] cssheader=[boxoverTooltipHeader] cssbody=[boxoverTooltipBody] delay=[200] Info](/assets/info-092c542cd75fb00e5270a8b7c81dc616.png)
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Favourited By (0)
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