Web Service PfamScan (SOAP) SOAP Gb

Specified Name (from WSDL): JDispatcherService |
PASSED
Annotations: 30 Total number of annotations from the provider's definition / description document. 12 Total number of annotations submitted by members of BioCatalogue. 18 Total number of annotations sourced from other registries. 0

Overview

Provider:
Icon  European Bioinformatics Institute (EMBL-EBI)

Location:
United Kingdom Gb

Submitter/Source:
Michael CornellGbCurator (over 3 years ago)

Base URL:
http://www.ebi.ac.uk/Tools/services/soap/pfamscan

WSDL Location:
http://www.ebi.ac.uk/Tools/services/soap/pfamscan?wsdl (download last cached WSDL file)

Description(s):
by Michael Cornell Curator(over 3 years ago)

PfamScan is used to search a FASTA sequence against a library of Pfam HMM

ELIXIR Description(s): Info
by Michael Cornell Curator(over 2 years ago)

PfamScan is used to search a FASTA sequence against a library of Pfam HMM

License(s): Info
by EMBL-EBI Support (over 3 years ago)

This service does not require a license but should be used according to EMBL-EBI’s policies http://www.ebi.ac.uk/about/terms-of-use

Cost: Info
by EMBL-EBI Support (over 3 years ago)

Free.

Usage conditions: Info
by EMBL-EBI Support (over 3 years ago)

E-mail supplied for submission must be a valid e-mail address and no more than 30 concurrent jobs should be submitted at any one time, see http://www.ebi.ac.uk/Tools/webservices/ and the EMBL-EBI Terms of Use: http://www.ebi.ac.uk/about/terms-of-use

Contact info: Info
by EMBL-EBI Support (over 3 years ago)
How to cite this service: Info
No info yet
Publications about this service: Info
by EMBL-EBI Support (over 3 years ago)

Mistry J., Bateman A. and Finn R.D. (2007) “Predicting active site residue annotations in the Pfam database” BMC Bioinformatics 8:298 PMID: 17688688 (http://europepmc.org/abstract/MED/17688688) DOI: 10.1186/1471-2105-8-298

by EMBL-EBI Support (over 3 years ago)

McWilliam H., Li W., Uludag M., Squizzato S., Park Y.M., Buso N., Cowley A.P. and Lopez R. (2013) “Analysis Tool Web Services from the EMBL-EBI” Nucleic Acids Res. 41(Web Server issue):W597-600 PMID: 23671338 (http://europepmc.org/abstract/MED/23671338) DOI: 10.1093/nar/gkt376

by EMBL-EBI Support (over 3 years ago)

Goujon M., McWilliam H., Li W., Valentin F., Squizzato S., Paern J. and Lopez R (2010) “A new bioinformatics analysis tools framework at EMBL-EBI” Nucleic Acids Res. 38(Web Server issue):W695-9 PMID: 20439314 (http://europepmc.org/abstract/MED/20439314) DOI: 10.1093/nar/gkq313

Citations of this service: Info
No info yet

Info Members Responsible for this Service (2)

Info Favourited By (0)

No one

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