InterProScan 5 (SOAP) SOAP

Provider:
European Bioinformatics Institute (EMBL-EBI)

Location:
United Kingdom

Submitter/Source:
EMBL-EBI Support (over 1 year ago)

Base URL:
http://www.ebi.ac.uk/Tools/services/soap/iprscan5

WSDL Location:
http://www.ebi.ac.uk/Tools/services/soap/iprscan5?wsdl(download last cached WSDL file)

Documentation URL(s): EMBL-EBI Support (over 1 year ago) http://www.ebi.ac.uk/Tools/webservices/services/pfa/iprscan5_soap Login to add a documentation URL Description(s): EMBL-EBI Support(over 1 year ago)

InterProScan is a tool that combines different protein signature recognition methods into one resource. InterProScan 5 is a reimplementation of the traditional InterProScan 4.x series and adds features such as pathway annotations and signal peptide and transmembrane prediction using Phobius.

Login to add a description ELIXIR Description(s): Michael Cornell Curator(6 months ago)

InterProScan is a tool that combines different protein signature recognition methods into one resource. InterProScan 5 is a reimplementation of the traditional InterProScan 4.x series and adds features such as pathway annotations and signal peptide and transmembrane prediction using Phobius.

Login to add an elixir description License(s): EMBL-EBI Support(over 1 year ago)

This service does not require a license but should be used according to EMBL-EBI’s policies http://www.ebi.ac.uk/about/terms-of-use

Login to add license info Cost: EMBL-EBI Support(over 1 year ago)

Free.

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E-mail supplied for submission must be a valid e-mail address and no more than 30 concurrent jobs should be submitted at any one time, see http://www.ebi.ac.uk/Tools/webservices/ and the EMBL-EBI Terms of Use: http://www.ebi.ac.uk/about/terms-of-use

Login to add usage conditions info Contact info: EMBL-EBI Support(over 1 year ago)

EMBL-EBI support: http://www.ebi.ac.uk/support/WebServices

Login to add contact info How to cite this service: No info yet Login to add how to cite info Publications about this service: for this service (this can be in a common citation format like Bibtex, MLA or APA, a DOI, a URL, etc.) EMBL-EBI Support(over 1 year ago)

Jones P., Binns D., Chang H.Y., Fraser M., Li W., McAnulla C., McWilliam H., Maslen J., Mitchell A., Nuka G., Pesseat S., Quinn A.F., Sangrador-Vegas A., Scheremetjew M., Yong S.Y., Lopez R. and Hunter S. (2014) “InterProScan 5: genome-scale protein function classification” Bioinformatics 30(9):1236-1240 PMID: 24451626 (http://europepmc.org/abstract/MED/24451626) DOI: 10.1093/bioinformatics/btu031

EMBL-EBI Support(over 1 year ago)

McWilliam H., Li W., Uludag M., Squizzato S., Park Y.M., Buso N., Cowley A.P. and Lopez R. (2013) “Analysis Tool Web Services from the EMBL-EBI” Nucleic Acids Res. 41(Web Server issue):W597-600 PMID: 23671338 (http://europepmc.org/abstract/MED/23671338) DOI: 10.1093/nar/gkt376

EMBL-EBI Support(over 1 year ago)

Goujon M., McWilliam H., Li W., Valentin F., Squizzato S., Paern J. and Lopez R (2010) “A new bioinformatics analysis tools framework at EMBL-EBI” Nucleic Acids Res. 38(Web Server issue):W695-9 PMID: 20439314 (http://europepmc.org/abstract/MED/20439314) DOI: 10.1093/nar/gkq313

Login to add publications info Citations of this service: No info yet Login to add citations info Example workflows using this service: See all workflows on myExperiment that use this service Login to add workflows info