Web Service InterProScan 5 (SOAP) SOAP Gb

Specified Name (from WSDL): JDispatcherService |
aka InterProScan (SOAP) aka InterProScan Add_annotation_inactiveAdd_annotation_inactiveLog in to add alternative_name
PASSED
Annotations: 38 Total number of annotations from the provider's definition / description document. 12 Total number of annotations submitted by members of BioCatalogue. 26 Total number of annotations sourced from other registries. 0

Overview

Provider:
Icon  European Bioinformatics Institute (EMBL-EBI)

Location:
United Kingdom Gb

Submitter/Source:
EMBL-EBI SupportGb (over 3 years ago)

Base URL:
http://www.ebi.ac.uk/Tools/services/soap/iprscan5

WSDL Location:
http://www.ebi.ac.uk/Tools/services/soap/iprscan5?wsdl (download last cached WSDL file)

Description(s):
by EMBL-EBI Support (over 3 years ago)

InterProScan is a tool that combines different protein signature recognition methods into one resource. InterProScan 5 is a reimplementation of the traditional InterProScan 4.x series and adds features such as pathway annotations and signal peptide and transmembrane prediction using Phobius.

ELIXIR Description(s): Info
by Michael Cornell Curator(over 2 years ago)

InterProScan is a tool that combines different protein signature recognition methods into one resource. InterProScan 5 is a reimplementation of the traditional InterProScan 4.x series and adds features such as pathway annotations and signal peptide and transmembrane prediction using Phobius.

License(s): Info
by EMBL-EBI Support (over 3 years ago)

This service does not require a license but should be used according to EMBL-EBI’s policies http://www.ebi.ac.uk/about/terms-of-use

Cost: Info
by EMBL-EBI Support (over 3 years ago)

Free.

Usage conditions: Info
by EMBL-EBI Support (over 3 years ago)

E-mail supplied for submission must be a valid e-mail address and no more than 30 concurrent jobs should be submitted at any one time, see http://www.ebi.ac.uk/Tools/webservices/ and the EMBL-EBI Terms of Use: http://www.ebi.ac.uk/about/terms-of-use

Contact info: Info
by EMBL-EBI Support (over 3 years ago)
How to cite this service: Info
No info yet
Publications about this service: Info
by EMBL-EBI Support (over 3 years ago)

Jones P., Binns D., Chang H.Y., Fraser M., Li W., McAnulla C., McWilliam H., Maslen J., Mitchell A., Nuka G., Pesseat S., Quinn A.F., Sangrador-Vegas A., Scheremetjew M., Yong S.Y., Lopez R. and Hunter S. (2014) “InterProScan 5: genome-scale protein function classification” Bioinformatics 30(9):1236-1240 PMID: 24451626 (http://europepmc.org/abstract/MED/24451626) DOI: 10.1093/bioinformatics/btu031

by EMBL-EBI Support (over 3 years ago)

McWilliam H., Li W., Uludag M., Squizzato S., Park Y.M., Buso N., Cowley A.P. and Lopez R. (2013) “Analysis Tool Web Services from the EMBL-EBI” Nucleic Acids Res. 41(Web Server issue):W597-600 PMID: 23671338 (http://europepmc.org/abstract/MED/23671338) DOI: 10.1093/nar/gkt376

by EMBL-EBI Support (over 3 years ago)

Goujon M., McWilliam H., Li W., Valentin F., Squizzato S., Paern J. and Lopez R (2010) “A new bioinformatics analysis tools framework at EMBL-EBI” Nucleic Acids Res. 38(Web Server issue):W695-9 PMID: 20439314 (http://europepmc.org/abstract/MED/20439314) DOI: 10.1093/nar/gkq313

Citations of this service: Info
No info yet

Info Members Responsible for this Service (1)

Info Favourited By (0)

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