Michael CornellCurator (over 6 years ago)
http://www.compbio.dundee.ac.uk/jabaws/MSAprobsWS?wsdl(download last cached WSDL file)
Documentation URL(s): Michael Cornell Curator(over 6 years ago) http://msaprobs.sourceforge.net/homepage.htm#latest Login to add a documentation URL Description(s): Michael Cornell Curator(over 6 years ago)
MSAProbs is a new and practical multiple alignment algorithm for protein sequences. The design of MSAProbs is based on a combination of pair hidden Markov models and partition functions to calculate posterior probabilities. Assessed using the popular benchmarks: BAliBASE, PREFAB, SABmark and OXBENCH, MSAProbs achieves statistically significant accuracy improvements over the existing top performing aligners, including ClustalW, MAFFT, MUSCLE, ProbCons and Probalign. Furthermore, MSAProbs is optimized for multi-core CPUs by employing a multi-threaded design, leading to a competitive execution time compared to other aligners.
Login to add a description ELIXIR Description(s): Michael Cornell Curator(over 5 years ago)
MSAProbs is a multiple alignment algorithm for protein sequences.
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