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aka
Amino Acid Conservation
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Overview
Provider:
www-compbio-dundee-ac-uk
Location:
United Kingdom
Submitter/Source:
Michael Cornell
Curator
(over 6 years ago)
Base URL:
http://www.compbio.dundee.ac.uk:80/jabaws/AAConWS
WSDL Location:
http://www.compbio.dundee.ac.uk/jabaws/AAConWS?wsdl (download last cached WSDL file)
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AACon is a set of tools implementing 17 different conservation scores reviewed by Valdar as well as the more complex SMERFS algorithm for predicting protein functional sites. AACon has been written with efficiency in mind and takes less than a second to calculate conservation by all 18 methods for an alignment of 500 sequences 350 residues long on a single CPU. AACon exploits parallelism for the more demanding methods and to allow multiple methods to run simultaneously.
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AACon is a set of tools implementing different conservation scores.
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