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aka
EBI Search
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Overview
Provider:
European Bioinformatics Institute (EMBL-EBI)
Location:
United Kingdom
Submitter/Source:
Michael Cornell
Curator
(over 6 years ago)
Base URL:
http://www.ebi.ac.uk/ebisearch/ws/rest
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EB-eye is a high-performance, full-featured text search engine using Apache Lucene technology to index EMBL-EBI databases in various formats (e.g. flat-files, XML dumps, OBO format, etc.) and provides very fast access to the EMBL-EBI’s data resources. The system allows the user to search globally across all EMBL-EBI databases.
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![header=[] body=[A publication that others ought to use when citing this service (this can be in a common citation format like Bibtex, MLA or APA, a DOI, a URL, etc.)] cssheader=[boxoverTooltipHeader] cssbody=[boxoverTooltipBody] delay=[200] Info](/assets/info-092c542cd75fb00e5270a8b7c81dc616.png)
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Madeira F., Park Y.M., Lee J., Buso N., Gur T., Madhusoodanan N., Basutkar P., Tivey ARN., Potter SC., Finn RD., Lopez R. (2019)
The EMBL-EBI search and sequence analysis tools APIs in 2019
Nucleic Acids Research, April 12, 2019; doi: 10.1093/nar/gkz268
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Madeira F., Park Y.M., Lee J., Buso N., Gur T., Madhusoodanan N., Basutkar P., Tivey ARN., Potter SC., Finn RD., Lopez R. (2019)
The EMBL-EBI search and sequence analysis tools APIs in 2019..
Nucleic Acids Research published online on April 12, 2019.
Abstract DOI: 10.1093/nar/gkz268 full-text PDF
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Park Y.M., Squizzato S., Buso N., Gur T., Lopez R. (2017)
The EBI search engine: EBI search as a service—making biological data accessible for all.
Nucleic Acids Research published online on May 2, 2017. Abstract DOI: 10.1093/nar/gkx359 full-text PDF
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Squizzato S., Park Y.M., Buso N., Gur T., Cowley A., Li W., Uludag M., Pundir S., Cham J.A., McWilliam H., Lopez R. (2015) The EBI Search engine: providing search and retrieval functionality for biological data from EMBL-EBI.
Nucleic Acids Research published online on April 8, 2015. Abstract DOI: 10.1093/nar/gkv316 full-text PDF
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Valentin F., Squizzato S., Goujon M., McWilliam H., Paern J. and Lopez R. (2010)
Fast and efficient searching of biological data resources using EB-eye.
Briefings in Bioinformatics Advance Access published online on February 11, 2010.
Abstract DOI: 10.1093/bib/bbp065 full-text PDF
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Goujon M., Valentin F., Miyar T., McWilliam H. and Lopez, R. (2008)
The EB-eye
EMBnet.news 13.4: 18-21 December 2007.
full-text PDF