blastProDom SOAP

Provider:
PRABI – Rhone-Alpes Bioinformatics Center

Location:
France

Submitter / Source:
Franck Tanoh (about 1 year ago)

Base URL:
http://prodom.prabi.fr/prodom/2006.1/cgi-bin/blastprod.cgi

WSDL Location:
http://prodom.prabi.fr/prodom/current/wsdl/blastliteral.wsdl(download last cached WSDL file)

Documentation URL(s): Franck Tanoh (about 1 year ago)http://prodom.prabi.fr/prodom/current/documentation/blastProDom.html

Login to add a documentation URL Description(s): from provider’s description doc (about 1 year ago) Contact : Daniel Kahn, kahn@biomserv.univ-lyon1.fr
Reference : Servant F, Bru C, Carrière S, Courcelle E, Gouzy J, Peyruc D, Kahn D (2002) ProDom: Automated clustering of homologous domains. Briefings in Bioinformatics. vol 3, no 3:246-251

Franck Tanoh (about 1 year ago)Executes blast on a blast (blastn or blastp) on ProDom database (protein domain database).
ProDom database home page: http://prodom.prabi.fr/prodom/current/html/home.php

ProDom team (9 months ago)blastProDom performs a blast (blastx or blastp) on the protein domain family database ProDom : enter a sequence (nucleotides or proteins, raw or fasta format) and it returns a blast output with the name of the families corresponding to the hits found, and a URL to get the image visualizing the blasted domains on the protein.

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